Protein Info for ABZR86_RS19595 in Dyella japonica UNC79MFTsu3.2

Annotation: glycoside hydrolase family 3 protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 842 PF00933: Glyco_hydro_3" amino acids 23 to 301 (279 residues), 160.6 bits, see alignment E=1.4e-50 PF01915: Glyco_hydro_3_C" amino acids 342 to 719 (378 residues), 207.2 bits, see alignment E=5.3e-65 PF07691: PA14" amino acids 430 to 564 (135 residues), 80.5 bits, see alignment E=2.3e-26 PF14310: Fn3-like" amino acids 756 to 822 (67 residues), 56 bits, see alignment E=7.1e-19

Best Hits

KEGG orthology group: K01188, beta-glucosidase [EC: 3.2.1.21] (inferred from 64% identity to xac:XAC3076)

Predicted SEED Role

"Beta-glucosidase (EC 3.2.1.21)" in subsystem Beta-Glucoside Metabolism or Fructooligosaccharides(FOS) and Raffinose Utilization (EC 3.2.1.21)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 3.2.1.21

Use Curated BLAST to search for 3.2.1.21

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2JGQ0 at UniProt or InterPro

Protein Sequence (842 amino acids)

>ABZR86_RS19595 glycoside hydrolase family 3 protein (Dyella japonica UNC79MFTsu3.2)
MDAAQAERRAAELVARMTLEEKIAQLQSSAPAIPRLGVPAYDWWSEGLHGTARAGYATVF
PQAIGLAASWNAALLHEVGEVVSTEARAKYNLAGRGDHPRYHGLSIWSPNINIFRDPRWG
RGQETYGEDPFLTGTLATRFVRGIQGDDPAELKAAATPKHFAVHSGPEKGRHGFDSHTPP
HDLEDTYLPAFRMAVTEGQAASVMCAYNALEGTPACASPLLLQERLRRDWRFAGYVVSDC
DAVDDMTQFHHYKPDNAGSSAAAVAAGTDLDCGIAYAALGEAVRKGQVSEAVLDQAARRL
FAARYRMGMLDEPNGPYATLGAADINSPAHRALALRAARESIVLLKNEGGALPLKQDTRI
AVIGPNADALNILEANYHGTAVDPVTPLAGLRKQFGAARVSYAQGATLAQGVSVPVPASA
LRTGGKDAGPGLRGEYFDHADFNGKPRLVRTDHRIDFDWDEVPPAKGFAAANYAVRWTGD
LLPPGAGDYNLNVHIDRCFDCKGHDPVRLYVDGKLVLDDHGKDYDLNVPLHFADTRPRPL
KLELRHSGEDQGIRLQWNAPADAQLREAKEAVAKADVVVAVVGLSPDVEGEELQVSVPGF
SGGDRTDLALPATQQKLLEAAKASGKPLVVVLTSGSAVALNWAKQHADAIVAAWYPGEEG
GTAIADVLAGNYNPAGRLPVTFYASADDLPKFDDYRMEGRTYRYFRGTPLFAFGEGLSYT
RFAYEAPTLSSKTLKAGDKLGVDVRVRNAGERDGDEVVQVYLSSSEEGAPRHSLVGFRRV
AFKAGESKLVHFEIDPRQLSVVNLKGERKVAPGKYVLFAGGQQPAGNTGTEFLIEGSLAL
PR