Protein Info for ABZR86_RS19465 in Dyella japonica UNC79MFTsu3.2

Annotation: stage II sporulation protein M

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 327 transmembrane" amino acids 107 to 128 (22 residues), see Phobius details amino acids 182 to 208 (27 residues), see Phobius details amino acids 219 to 245 (27 residues), see Phobius details amino acids 262 to 288 (27 residues), see Phobius details amino acids 296 to 315 (20 residues), see Phobius details PF01944: SpoIIM" amino acids 112 to 289 (178 residues), 102.9 bits, see alignment E=9e-34

Best Hits

KEGG orthology group: None (inferred from 60% identity to smt:Smal_3844)

Predicted SEED Role

"FIG01248689: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2JH45 at UniProt or InterPro

Protein Sequence (327 amino acids)

>ABZR86_RS19465 stage II sporulation protein M (Dyella japonica UNC79MFTsu3.2)
MKQERFVALHREAWSELQHWLDLVDSKPRQALRDARASGFPVEYRRLCHHLALARARGYS
GEVTDRLQRMVQQGHRLLYRPPAPRWHRALSFLVAGFPRLVRSEWRCMAAAAVLFFAPAL
FCLVALQFHPQWAHSIFGSAQLAEFEKMYDPANHRIGRSSGTDLAMFGHYVMNNVSIAFR
TFASGLALGVGAVYVLAANGVIIGGVAGHLTQMGYGGPFWRFVAAHAAFELTALVIAGGA
GLKLGLTLLAPGRQRRGPAMVAAGWIGAQLALGAFAMLLIAAAIEAFWSSVAWFPDLLKF
GSAALLWLLVLGWLWRGGAQAEGGDGA