Protein Info for ABZR86_RS18995 in Dyella japonica UNC79MFTsu3.2

Annotation: CPBP family intramembrane glutamic endopeptidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 308 transmembrane" amino acids 28 to 52 (25 residues), see Phobius details amino acids 64 to 84 (21 residues), see Phobius details amino acids 105 to 126 (22 residues), see Phobius details amino acids 138 to 157 (20 residues), see Phobius details amino acids 169 to 189 (21 residues), see Phobius details amino acids 195 to 215 (21 residues), see Phobius details amino acids 227 to 251 (25 residues), see Phobius details amino acids 269 to 289 (21 residues), see Phobius details PF02517: Rce1-like" amino acids 139 to 232 (94 residues), 73.4 bits, see alignment E=7.3e-25

Best Hits

KEGG orthology group: K07052, (no description) (inferred from 42% identity to cph:Cpha266_0281)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2GE30 at UniProt or InterPro

Protein Sequence (308 amino acids)

>ABZR86_RS18995 CPBP family intramembrane glutamic endopeptidase (Dyella japonica UNC79MFTsu3.2)
MDAIGTQLAFVTPANATRWQRRLVFSPVARIVSFVVTMIAAGFLLGSLLHLLGWTAKDAD
PALRALAMLLEQVLPALIAYLALVRGVERRPVAELSLRRLPAQGGLGLLIGIALMSITVA
ALWLLGSYHVLRTDPAADWVPAVLVVGLGAGLGEEILSRGVLFRIVEEGLGTWWALAISA
LFFGAAHLGNPGATAWSSAAIAIEAGILLGLLYHVTRSLWICVGMHLAWNVMQGTVFGIA
VSGLPAHGFLVASLTGPTWLSGGGFGAEASVVALLVCSSLSALLLAIALRRGSIVPPSWK
RRPPTTPA