Protein Info for ABZR86_RS18765 in Dyella japonica UNC79MFTsu3.2

Annotation: dehydrogenase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 342 PF00288: GHMP_kinases_N" amino acids 101 to 168 (68 residues), 59.5 bits, see alignment E=3.4e-20 PF08544: GHMP_kinases_C" amino acids 242 to 323 (82 residues), 36.4 bits, see alignment E=5.5e-13

Best Hits

KEGG orthology group: K07031, (no description) (inferred from 56% identity to nde:NIDE3425)

Predicted SEED Role

"D,D-heptose 7-phosphate kinase" in subsystem Capsular heptose biosynthesis

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2GAD3 at UniProt or InterPro

Protein Sequence (342 amino acids)

>ABZR86_RS18765 dehydrogenase (Dyella japonica UNC79MFTsu3.2)
MIVRSRAPLRLGLAGGGTDVSPYCDIYGGHVMNATIDKHAFAILSEPESGQREFCAIDVG
VSEVLGGDEALVPDGPLKLLKGVYARICNEFLGGEPRPLKVQTFSDAPPGSGLGSSSTMV
VALVQAFAEYFALPLGEYEVAHLAYDIERKDLGLAGGKQDQYAAAFGGFNFMEFYKDDRV
IVNPLRIKDWVWSELEASLVLYFTGVSRASADIIDQQSRNVVEGNRSSIDAMHSLKQEAV
QMKECVLRGDLQGLARTLQAGWEAKKNMASSISNPVIEQVERVAFANGAHAAKVSGAGGG
GFMMFMCSPDKRIGLTRALAEQGGRLLDFHFTQQGATSWRIM