Protein Info for ABZR86_RS18660 in Dyella japonica UNC79MFTsu3.2
Annotation: alpha/beta hydrolase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 40% identical to YR526_MIMIV: Putative alpha/beta hydrolase R526 (MIMI_R526) from Acanthamoeba polyphaga mimivirus
KEGG orthology group: K01066, esterase / lipase [EC: 3.1.1.-] (inferred from 61% identity to ret:RHE_CH03106)Predicted SEED Role
"Lipase"
KEGG Metabolic Maps
- 2,4-Dichlorobenzoate degradation
- Alkaloid biosynthesis II
- Ascorbate and aldarate metabolism
- Glycerophospholipid metabolism
- Retinol metabolism
Isozymes
Compare fitness of predicted isozymes for: 3.1.1.-
Use Curated BLAST to search for 3.1.1.-
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A0A1I2G8X1 at UniProt or InterPro
Protein Sequence (338 amino acids)
>ABZR86_RS18660 alpha/beta hydrolase (Dyella japonica UNC79MFTsu3.2) MNTFKTLFAAIALGAAAQASAGQLEPSTQAFVDALAAKGGQPIYKLPVAQARQVLEDAQS GNVAKLAVDKQEISFDDAKAGKVSLTIIRPRGVDGTLPAVLYIHGAGWVLGSENTHDRLV RQLAHGARAAVVFVNYARAPEAKFPVQDEQAYAAARWVVEHGKQHGIDGNNMAIAGDSVG GNMTAAVTLMAKQRGGPKFVYQVLFYPVTDANFDNGSYREFANGPWLTLPAMQWFWNAYV PNEAARKNPLVTPLNATLEQLKGLPPALVITDDNDVLRDEGEAYAHKLMDAGVEVTATRY LGTIHDFVMLNALGDTPAARAAVEQAGGKLRAALYPAR