Protein Info for ABZR86_RS17510 in Dyella japonica UNC79MFTsu3.2

Annotation: carboxy terminal-processing peptidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 signal peptide" amino acids 1 to 22 (22 residues), see Phobius details PF17804: TSP_NTD" amino acids 58 to 239 (182 residues), 200 bits, see alignment E=9e-63 TIGR00225: C-terminal processing peptidase" amino acids 204 to 575 (372 residues), 308 bits, see alignment E=3.8e-96 PF00595: PDZ" amino acids 251 to 328 (78 residues), 46.9 bits, see alignment E=5.9e-16 PF03572: Peptidase_S41" amino acids 370 to 554 (185 residues), 164.7 bits, see alignment E=3e-52 PF11818: DUF3340" amino acids 560 to 710 (151 residues), 114.6 bits, see alignment E=9.7e-37

Best Hits

KEGG orthology group: K03797, carboxyl-terminal processing protease [EC: 3.4.21.102] (inferred from 55% identity to ara:Arad_7354)

Predicted SEED Role

"Tail-specific protease precursor (EC 3.4.21.102)" (EC 3.4.21.102)

Isozymes

Compare fitness of predicted isozymes for: 3.4.21.102

Use Curated BLAST to search for 3.4.21.102

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2JYW4 at UniProt or InterPro

Protein Sequence (750 amino acids)

>ABZR86_RS17510 carboxy terminal-processing peptidase (Dyella japonica UNC79MFTsu3.2)
MKLRTVSLALLLAFTVGGAQAQSAADLTGGTAGGRKASSLPLKPTLTEAQAAQLSARFLT
RFHYDAQPLDDAMSARIFKAYFDALDSEKVFFTQADMAKFAPLKTQFDDAIWNQDLSGPF
SVFNLYVQRAVERMSYARELLKKGFKLDTNESYAYDRKKADWPKDQAELDTLWRERTTND
WLRLKLAGKSDDDIRKTLDKRYANYIERVRQLDGEDAFQSFMNAYAESTDPHTDYLGPRA
AENFDISMKLSLEGIGAVLGVRDEYVVVSQVVPAGPAAKSGKIHAGDRIVGVGQGADGAI
VDVIGWRNDDVVKLIRGKKDTTVRLEILPADVGVDGKHEVVSMVRQKVSIEEQAAKKKII
EIKDGNVSRKIGVIDLPTFYSDFGARREGDKNFKSATRDVAKLLGELKQAGVEGVIMDLR
NNGGGSLTEANELTGLFIDKGPVVQVRDARGQVDVQGDDDPGMAWTGPMAVLVNRGSASA
SEIFAAAIQDYGRGLIIGQPSFGKGTVQNLVDLDRFASRTKEKPQLGELKMTIAEFFRIN
GGSTQLKGVTPDINFPKSGDEKDFGESTYDNALAWTQIAPAPDYKPVADLKAYLGQLQAK
HDARATKSPGWKLMLDELAQYRKMRDKTTISLNLAQRQAERKDQEALQADFRARHKAIDG
NSFADDRDGLDDGLNANERSLKSEQKQEDDAKKAADPQLEETAHILFDAVGLIKGDAKLA
AEVLPYGGKFSPNATAAATTEAKNPAPGTR