Protein Info for ABZR86_RS17320 in Dyella japonica UNC79MFTsu3.2

Annotation: TonB-dependent receptor

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1040 signal peptide" amino acids 1 to 33 (33 residues), see Phobius details PF13620: CarboxypepD_reg" amino acids 48 to 112 (65 residues), 41 bits, see alignment 3.2e-14 PF07715: Plug" amino acids 144 to 244 (101 residues), 33.8 bits, see alignment E=6.2e-12 PF00593: TonB_dep_Rec" amino acids 489 to 648 (160 residues), 40.2 bits, see alignment E=6.3e-14

Best Hits

KEGG orthology group: None (inferred from 61% identity to sml:Smlt3449)

Predicted SEED Role

"Oar protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2JRP7 at UniProt or InterPro

Protein Sequence (1040 amino acids)

>ABZR86_RS17320 TonB-dependent receptor (Dyella japonica UNC79MFTsu3.2)
MTITTFKASRSLRYSALTLAMGLAFASTGALAQSNTTGSIFGQVAAKQGSTVVIENTETG
FSRTTTVDDSGRYRFSTLPVGKYKVTLQNNGSAVSTRDNIVVAISSGTEVSFGAAVAGND
AKNLEGVSVVASALPAIDVSSVDTRTVLTSEQLNKLPIARSVGAAALLAPGVVENSSYST
TGFGNIPSFGGAASSENAYYINGYAVTNPLQSLGATTLPFDAIDQEQVLTGGYGAEFGRS
TGGVINIVTKRGSNQWKGGVYAILRPEALRANPRNNYFPNTGYYGPNTALHTDGSLYWYR
NKNQYSYNTYGAYASGPLIKDKLFFYVDGEMTKQDGTSVASFSNSSSSTAKTGWNDYTYK
MPRWTAKIDWNITDSNILEFTGVQDNIVYDSSRYAFNYNDYSHGEVKNGGVHQKDSSRLY
IAKYTSYITDDLTVSALVGKQNLEHLQQPFGYDPSCPYISSSATVQAPGLTYGACQQGAV
SSLLIPGANDKTHGWRLDVEYRLGDHTLRAGYDAQTAESLTGSAYPGGYAWVYGWQTDPN
IGIDASHGVASPASAGGLGAQGYFVSRAYNTQNAKVKTEQQAQFIEDRWQITDRWLLSLG
LRNEQFSNYNGDGKPYARQRHQLAPRIGAAWDVFGDSSLKLFANAGRYHLAMPNNVAVRG
ASGSLITNEYFTYTGVDAKTGAPTGLTPVAVDRSKGYACGNTNAISSNLECGEAPDPRTV
AAKGLKSHYQDEYIAGLEQQISPTYNWGAKLTYRKLRSAIDDTCAPALGGSCFLFNPGTT
NTFLQEQADGSFKSVTYTREQLGLPELKRKYYALDLFLEHPFADKWYGRVDYTFSRNYGN
TEGQLASDLDTGNGGQADVSTTQDWDLPQLMVGSNGLLPNNRKHQIKAFGYFQATEEWRF
GASLIAASGRPKNCTSHYPTADKGLYSGAAYWFCGLSGSGTAPGSTGYKPAASDYAFSPR
GSHGSAPWTYQLNLNVAYQPAWLKDLTLQLDVINVLNRQVATAYNYRYETSARNTPNQLY
LRELNVSDPRYFRITARYDF