Protein Info for ABZR86_RS17180 in Dyella japonica UNC79MFTsu3.2

Annotation: glycosyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 375 PF13439: Glyco_transf_4" amino acids 23 to 174 (152 residues), 100.1 bits, see alignment E=4.3e-32 PF13579: Glyco_trans_4_4" amino acids 23 to 170 (148 residues), 60.2 bits, see alignment E=9.5e-20 PF13477: Glyco_trans_4_2" amino acids 31 to 125 (95 residues), 31.7 bits, see alignment E=5.1e-11 PF20706: GT4-conflict" amino acids 197 to 324 (128 residues), 32.8 bits, see alignment E=1.2e-11 PF00534: Glycos_transf_1" amino acids 201 to 345 (145 residues), 65.6 bits, see alignment E=1.3e-21 PF13692: Glyco_trans_1_4" amino acids 204 to 345 (142 residues), 48.5 bits, see alignment E=3.5e-16

Best Hits

KEGG orthology group: None (inferred from 59% identity to xal:XALc_0743)

Predicted SEED Role

"Glycosyltransferase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2HTH1 at UniProt or InterPro

Protein Sequence (375 amino acids)

>ABZR86_RS17180 glycosyltransferase (Dyella japonica UNC79MFTsu3.2)
MSAVAAPARSLTVVQLIPALQSGGAERSALEVARALVQAGHRSVVISAGGRLAGQLEAEG
SEHITLDIGRKSLRTLLRVGALRRALAELKPDIVHARSRLPAWLGWWAIKGLPQRPHFVT
TVHGLNSPGRYSSILLRGERVIAVSQTLRDYVLSHYRWLEPSRVRVIPRGIDPEAFPYGH
RPDDAWQKAFFTEFPRLAGAPLLTLPGRGTRLKGHHDAIELIAELKRRGIDARLLLLGVI
EAGREAYVAELRELISARGIESQVVLTPPRNDVRDIYAVSALVLQLSNKPESFGRTVVEA
LSLCRPVLGYAHGGVGELLAELYPAGRVPVGDRERLVERAAELLRVAPPIPMLQSYRLSD
MQQATLALYEEVVAG