Protein Info for ABZR86_RS16715 in Dyella japonica UNC79MFTsu3.2

Annotation: host specificity protein J

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1055 PF13550: Phage-tail_3" amino acids 340 to 500 (161 residues), 104.3 bits, see alignment E=9.2e-34 PF09327: DUF1983" amino acids 901 to 982 (82 residues), 105.2 bits, see alignment 2.3e-34

Best Hits

KEGG orthology group: None (inferred from 54% identity to rso:RSc1698)

Predicted SEED Role

"Phage tail fiber protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2H918 at UniProt or InterPro

Protein Sequence (1055 amino acids)

>ABZR86_RS16715 host specificity protein J (Dyella japonica UNC79MFTsu3.2)
MTSTLQGAKGGGKQRTPVESPDSLRSIAYFRILDLVSEGEIGGLVNGLQSIYLDETPLAN
PDGSLNFQNVHVETRTGTQDQEEVPGYPAVENEINVGVELKQSTPWIRSLSNTSLSAVRI
TIGVPGLSNANTSNGDINGYSVQYKIEVQTDAGAWQLAYNGAITGKTTSKYQRSHRIDLP
AAQNGWNVRVTRITANANSSAIADITTIDSYTEVIDAKLRYPNSALLGISGDAAQFSNIP
SRAYDLWGRVIQVPNNYDPLARSYSGVWDGSFKPAWTDNPAWIYYDLATHPRYGLGHLVT
AAQVNKWELYRIAQYCDQPVSDGKGGAEPRFTCNVFLQSASDAYKLLSDLASVFRGISFW
TGGAITASADMPADPVYAYTAANVIGGQFTYAASTRKTRYTTALVTWNDPSDFYRAKVEY
VEDRTGLARYGIQQATLTAFGCTSQAQAQRAGQWVLLTSRLETDTVTFKVGLDGTVAAPG
QIIRVTDPARAGKRQGGRIHDATRTVVTVDKAPEQVAAGDRLTVMLATGASEAQTITAID
GVRLSVAAPGFSVQPEAEAVWVVESDTLAAQTYRVLSVTEDKSSSEISYTITALQHVADK
FAAIDNGAIIQIPPISSLPASTQAPPANVQLNGHVVITQGIATNVVTISWDAASGATGYQ
VEWRRNDGEWVSAGRTPGLSLDVEGIYTGSYVARVRAVSPGGVVSMPALSAPTDILGKTG
APPVVATFKATPKVWGIHLEWSFPAGTDDTQRTEVWRSNTANLQDATKMADLAYPQNSLE
IDGLAAGASFYFWVRLVDKTGNVGTFYPDGAGLPGQASASAADYEPVITGLIEQTQLGQE
ILEGAKLATPDMAGDASEWAGDGSHFAGTWTLLDAVQDGDRAMASRVDLVQATVSDTSAT
VQQTSQAVVDLNGKVSATWTVKCQVTADGHIYGAGMGLGVEQQPDGSYQSQVLFQADRFA
VINSTNGQITTPFVIQNGQTYIKQALIGDGWIDNAKIGDFIQSTDYVAGVRGWKISKSGN
SFELNGSGGGRLSITNQLIQVFDGNGTLRVRLGMW