Protein Info for ABZR86_RS16555 in Dyella japonica UNC79MFTsu3.2

Annotation: DMT family transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 309 transmembrane" amino acids 12 to 33 (22 residues), see Phobius details amino acids 42 to 59 (18 residues), see Phobius details amino acids 71 to 91 (21 residues), see Phobius details amino acids 97 to 119 (23 residues), see Phobius details amino acids 128 to 146 (19 residues), see Phobius details amino acids 153 to 170 (18 residues), see Phobius details amino acids 182 to 201 (20 residues), see Phobius details amino acids 213 to 233 (21 residues), see Phobius details amino acids 245 to 263 (19 residues), see Phobius details amino acids 269 to 288 (20 residues), see Phobius details PF00892: EamA" amino acids 11 to 142 (132 residues), 78.9 bits, see alignment E=2.1e-26 amino acids 156 to 287 (132 residues), 77.2 bits, see alignment E=6.9e-26

Best Hits

Swiss-Prot: 32% identical to BESF_STREN: Probable terminal-alkyne amino-acid exporter (besF) from Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057)

KEGG orthology group: None (inferred from 58% identity to bte:BTH_I1368)

Predicted SEED Role

"Permease of the drug/metabolite transporter (DMT) superfamily" in subsystem Queuosine-Archaeosine Biosynthesis

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2H921 at UniProt or InterPro

Protein Sequence (309 amino acids)

>ABZR86_RS16555 DMT family transporter (Dyella japonica UNC79MFTsu3.2)
MSTPERLDGRALIYIGIALLTWSSAYAAIAHALGSFTPGEVAFARLGIGALCFAVLLLVK
RVPLPARKDWPQLAVLGVLGLTAYHLCLNTAETRVASGTAAIIISLIPAATAALSAVWLR
ERLSARTLTGLGIALLGVVVVVLASGKGVKFEPMAALVLVSVVCSAVLFVGQKPLFARNS
MLGVTGFTFFAGALAALPFGLGLPQALAHAPMAHIGSLLWLGIAPTFIGYIAWNAALQRA
SASQVSSFIYFSPPIAVLIGWVWLGERPALLTVVGGAVTVGGVILANARKRPAAPANTAS
IAATPAKQC