Protein Info for ABZR86_RS16225 in Dyella japonica UNC79MFTsu3.2

Annotation: M56 family metallopeptidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 686 transmembrane" amino acids 15 to 33 (19 residues), see Phobius details amino acids 45 to 63 (19 residues), see Phobius details amino acids 127 to 144 (18 residues), see Phobius details amino acids 283 to 304 (22 residues), see Phobius details amino acids 324 to 343 (20 residues), see Phobius details PF05569: Peptidase_M56" amino acids 17 to 314 (298 residues), 172.2 bits, see alignment E=7.7e-55

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2HDI0 at UniProt or InterPro

Protein Sequence (686 amino acids)

>ABZR86_RS16225 M56 family metallopeptidase (Dyella japonica UNC79MFTsu3.2)
MDGYFRFADVLLDRLVWTSIQAAALIGAVWLLCRWLPRWSPAMRCLLWWLVGLQLMLGLA
LGRPLELPLLTPDADTVVLSTETPQEHGIAVHTAVTGNPLLLAPAPIAAAAKAPEAPAQP
WPWRETLASLWLLGMALQVFAALREWRETRAVIRAAEPVRDMALRAQCAEQARALGLRRC
PELRCSDVIVSPQVAGLWRPVVLLPKEHTLDAEECAMALAHELAHLRRGDLWLGWIPALA
QRAFFFHPLARWAMREYAFHREAACDAQVLDRSRAEPQDYGRLLLRLGVAFPVSAGLAGA
SPTFQNLKRRLTLLQQTDRVPPRLGAWLLVALVALAGALPYRVTARSMDLTLHADGGVAM
DGQQAMAAPEPDAVPTPPIVPAHPIPTVAAKPAPMAAAAAPMTATPMPAAAAKPAARATA
AVAPTPEPPEPPLAPPAPEPAPMAVPTPPPAPVAPPAPPSPVRVGRTSHVDIDIEAGAPR
GFAIIEPDFITLQGTESDLATARELQRGDEPILWMRRGNDAYVVRDRALLQRARDTYAPM
RDMAREQGQMAGKQGELAGRQSGLAARIAALSTRRVQMDSERIAITQERQKLRMEHPDGS
AAEAGVAASFDARLQSIQERMADLERERAEIDREQADLSRHQADLSRQQADISRHERDVA
QQVHSQLDRLIDQAVSDGLAQPSKSR