Protein Info for ABZR86_RS16125 in Dyella japonica UNC79MFTsu3.2

Annotation: sterol desaturase family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 414 transmembrane" amino acids 6 to 26 (21 residues), see Phobius details amino acids 45 to 73 (29 residues), see Phobius details amino acids 81 to 98 (18 residues), see Phobius details amino acids 130 to 167 (38 residues), see Phobius details amino acids 303 to 322 (20 residues), see Phobius details amino acids 333 to 351 (19 residues), see Phobius details amino acids 363 to 381 (19 residues), see Phobius details amino acids 387 to 407 (21 residues), see Phobius details PF04116: FA_hydroxylase" amino acids 85 to 217 (133 residues), 107.5 bits, see alignment E=3.4e-35

Best Hits

KEGG orthology group: None (inferred from 51% identity to pmk:MDS_0358)

Predicted SEED Role

"Sterol desaturase-related protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2K035 at UniProt or InterPro

Protein Sequence (414 amino acids)

>ABZR86_RS16125 sterol desaturase family protein (Dyella japonica UNC79MFTsu3.2)
MNTQEVIIGWATPAFFALIALELLVAKWRGRRVYHASDAVSSLSLGVISQIVAVFAKLLT
LGIYAWCAGHLALYTLPADRWWVWASGLLLYDFLYYWLHRAGHEVNILWAAHVVHHQSED
YNLSTALRQTGSGVLLGWLFYLPMALLGYPLEVFAVVALIDLLYQFWVHTELVGRLGWFD
RVFCSPSNHRAHHAVNERYLDRNYGGILIVWDRLFGSFVEEDDADPPVYGTRAPLRSWNP
LWANAEVYWATLKDAWHARRWRDKLLVWIKPPGWRPADVAERFPKPAFDMARARYAPPLP
RGLTAYGIAQFALLLLMGVWFLDMAKRMPASSLLAYAAFLLFSLTALGVLLEGRRAGTWL
EGARLAVTALAAVITGGWFGAASAPPALAPAIVALCLGSAAALATIRLRTRQPA