Protein Info for ABZR86_RS15485 in Dyella japonica UNC79MFTsu3.2

Annotation: glycoside hydrolase family 3 C-terminal domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 737 signal peptide" amino acids 1 to 31 (31 residues), see Phobius details PF00933: Glyco_hydro_3" amino acids 91 to 340 (250 residues), 120.3 bits, see alignment E=1.8e-38 PF01915: Glyco_hydro_3_C" amino acids 375 to 621 (247 residues), 185.7 bits, see alignment E=1.6e-58 PF14310: Fn3-like" amino acids 654 to 720 (67 residues), 58 bits, see alignment E=1.3e-19

Best Hits

KEGG orthology group: K05349, beta-glucosidase [EC: 3.2.1.21] (inferred from 55% identity to xcv:XCV1505)

Predicted SEED Role

"Beta-glucosidase (EC 3.2.1.21)" in subsystem Beta-Glucoside Metabolism or Fructooligosaccharides(FOS) and Raffinose Utilization (EC 3.2.1.21)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 3.2.1.21

Use Curated BLAST to search for 3.2.1.21

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2GPA2 at UniProt or InterPro

Protein Sequence (737 amino acids)

>ABZR86_RS15485 glycoside hydrolase family 3 C-terminal domain-containing protein (Dyella japonica UNC79MFTsu3.2)
MNYKIEGMLRSAVKLGLAAWMCTAIGQVPSARPWSDPKLSPDLRADQLLAQLTQDEKFHL
IRSYFAGPRKPEDKPVPPGYIGSAGYIPALERVGIPAIQESDAGLGVASSERMRPGDYAT
PLPAGPVTAATWDPKVAFRGGAMIGGEAHAKGFNVLLAGGTNLMREPRNGRNFEYAGEDP
LLAGTMVGEAIRGIESQHVVSTIKHFALNDQETARTTVDVRIGEQAMRESDLLAFELAIE
RGKPGSVMCSYNKLNGDWACENDYLLNQVLKRDWKYPGFVMSDWGGVHSAAKAVNAGLDQ
ESAAEIFDKDIYFDKPLRDALAKGEVKQARIDDMVRRILRSFFAAGVFEHPAKKAPIDEK
ANLAVARETLEAGAVLLRNDNQLLPLDVARLESIAVIGAHADKGVLAGGGSSLVTAKGGN
AVPGLKPSDWPGPVMYHPYSPLKALQSMAPKAKVQFTGGDDVAAAAALAAKSQVAVVFVQ
KWAGEDFDARDLSLPDGQDALVTAVAKANPRTIVVLENGSPVAMPWLEQVGAVLEVWYPG
GDAGNGIANLLSGKVNPSGRLPLSWPRDVLQLPRPELPGAGGSGALPQSVDYAIEGANVG
YRWYQSKDLQPLFPFGYGLSYTSFEHGALKVDTKDGKVTATVTVRNTGKRAGADVAQVYV
QVPGAKARRLAGFSKVFLKPGEQRELSIPLERKLLADFDTARHGWVVRGGEYVVSEGRSS
ADLGRPAAVQLSAGVLP