Protein Info for ABZR86_RS14505 in Dyella japonica UNC79MFTsu3.2

Annotation: putative Ig domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1500 1600 1700 1811 PF05345: He_PIG" amino acids 87 to 168 (82 residues), 53.5 bits, see alignment 6.6e-18 amino acids 178 to 255 (78 residues), 49.6 bits, see alignment (E = 1.1e-16) amino acids 346 to 436 (91 residues), 48.8 bits, see alignment 1.9e-16 amino acids 440 to 529 (90 residues), 49.1 bits, see alignment 1.6e-16 amino acids 532 to 621 (90 residues), 55 bits, see alignment 2.4e-18 amino acids 632 to 706 (75 residues), 45.2 bits, see alignment (E = 2.7e-15) amino acids 717 to 803 (87 residues), 57.9 bits, see alignment 2.8e-19 amino acids 813 to 896 (84 residues), 53.2 bits, see alignment 8.4e-18 amino acids 899 to 983 (85 residues), 55.8 bits, see alignment 1.3e-18 amino acids 985 to 1069 (85 residues), 48.4 bits, see alignment 2.7e-16 amino acids 1075 to 1155 (81 residues), 51.9 bits, see alignment (E = 2.1e-17) PF17963: Big_9" amino acids 250 to 332 (83 residues), 37.3 bits, see alignment 9e-13 amino acids 1153 to 1228 (76 residues), 44.1 bits, see alignment (E = 6.8e-15) amino acids 1237 to 1319 (83 residues), 30.8 bits, see alignment 1e-10 amino acids 1326 to 1413 (88 residues), 24.5 bits, see alignment 9.2e-09 PF03797: Autotransporter" amino acids 1536 to 1788 (253 residues), 171.3 bits, see alignment E=8.7e-54

Best Hits

Predicted SEED Role

"Fibronectin type III domain protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2JLU5 at UniProt or InterPro

Protein Sequence (1811 amino acids)

>ABZR86_RS14505 putative Ig domain-containing protein (Dyella japonica UNC79MFTsu3.2)
MPSGGTIVIDVPASCSGSGFLVIGDVTTPATHGTAQTTDYSNRKITYTNNGDGATTDSFK
FDDGLGGTDPAITVTLNIAPHTSPISITPTTLPSGTVAVPYSSTTLTASGGTSPYTYAVT
GGTLPAGLTLSSGGVISGTPTTDNTYSFTVTATDSASVTGIQSYTVTIAAPNVHISNTPT
DPVINAPYSFTFTATGGTAPYTYTLDGGTTLPAGLVLASNGTISGTPTALGLKSFTVRAT
DSGGFFSASNFTVTVQNLPPPVANPVSATVAYNSTNNPITLNITGGAPSSVAIGTNAAHG
SAVATGTSITYTPTAGYAGPDSFTYTATNAGGTSSPATVTITVSPPTITYTPSSPAAGTV
GVAYSQSVAGASGGAAPYTYTIASGALPAGITLAANGTLSGTPTANGTFNFTVKATDSST
GTGPFNKTSGTLTLTIAAPTINYTPTNPLPATVGTAYSRSLASATGGTAPYSYTIASGSL
PAGITLASNGTLSGTPTAGGTFNFTVTATDSSGGTGPFSATSGALTLTVNAPTVVVSPTT
LPNPTVATAYSQNVTASGGTAAYTFAITAGSLPSGLSMSSTGAITGTPTAAGAFNFTITA
TDSSTGTGPYTGSRAYTITVAAPTLTLTPASGATINGTAGVAVSGSFTAANGTAPYTYAV
TAGALPPGVSLSSTGTLSGSPTAAGNFNFTVTATDSSTGTSAPFTVSGSYTLAIVAPTIT
LSPSTLPVPAVGNAYSQTITASEGHPASFTYALTSGVLPTGLSLDGSTGVLSGTPTAAGP
FNFTITATDTGGFTGSQAYAVSVGAGTVILPPGALANAAAEAPYTHTFAASGGTSPYTYS
LTAGALPAGMALSSAGVLSGTPTAAGTFNFTVRAADSSTGAGAPFTASQSYSLTVTAPTI
TLAPASLPAASGGTAYSQTITASGGNGGYTYSLSAGALPPGIALSSAGVVSGTPTTTGSY
NFTVTATDGFSFTGSQAYTFTVNAPTITISPATLPAATGSIAYNQTLTAAGGNGGYTFSL
LSGALPPGISLSSAGVVSGTPTTTGSYNFTVKATDGFAFSGSQAYTVTVGAPAIVFTRTT
LPGGQVAVAYSQTVSATGGSGSFTYSLSTGALPPGIALSSAGVISGTPTTAGNFTFTVTA
TDSFGFTGSQPYTVGINQPVPVVVNDTATTPANAPVTINVTANDTGPITSIAVAQAPAHG
TATVSGLNAVYTPSTNFFGTDTFTYTATGPGGTSTPATVTVTVTPLAVPVAAAQSATVLA
GQSVTIHATAGATGAPFTGVTITTPPAKGTAAVSGTDIVYTAPLDASGAVAMDYTLSNPF
GTSTPAHITVTVNPVPLPAALTANVVAGRTVQVDLTSAAHGGPFTAATLVAVSPANAGHA
NIHNSGTSGYTLEFTAANNYSGQAQVSYTLSNAYATSATATVNITVTGRSDPSKDPEVLG
ILQAQADSARRLAVGQINNFQRRLESLHTGNGGGGFSNGISFSSASARQNRDPMTGLRGR
DDDWGRRFLVQPDEPTPGQGQRAGSTGQGQPGQWSVWTGGAVNFGKTLPGSSDDGIDFTT
SGISLGADRAINDQLAVGAGIGYGHDSSDVGKHDSRSTVDAYSAAVYGSYRPVPLVYVDA
LIGYQKMSFDSRRYVTDNGNTVTGSRDGKQLFASLSVGYEHRTQDGMLISPYGRFDFARA
TLDGYTEHGDDVYDLHYERSTVKTSTGVLGLRAQWVVKRDYGVWMPQLRAEFRHDFQGAS
VAAMRYADLLGGPLYQAVLGNTTRNHTLVGAGVMLQTLKGWSMRLEYQNLLDNSTRDNQS
IQLGVEKKFDP