Protein Info for ABZR86_RS13735 in Dyella japonica UNC79MFTsu3.2

Annotation: flagellar biosynthetic protein FliO

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 110 signal peptide" amino acids 1 to 21 (21 residues), see Phobius details transmembrane" amino acids 30 to 50 (21 residues), see Phobius details TIGR03500: flagellar biosynthetic protein FliO" amino acids 35 to 103 (69 residues), 56.7 bits, see alignment E=9.6e-20 PF04347: FliO" amino acids 49 to 107 (59 residues), 53.6 bits, see alignment E=1e-18

Best Hits

KEGG orthology group: K02418, flagellar protein FliO/FliZ (inferred from 30% identity to pfs:PFLU4426)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2EHX2 at UniProt or InterPro

Protein Sequence (110 amino acids)

>ABZR86_RS13735 flagellar biosynthetic protein FliO (Dyella japonica UNC79MFTsu3.2)
MKRLLSNVMAGLTWPSVALAADSPEGGSLWLGLLLPLIAVCAALLAWLWWLRKGQTLRGP
GGPLKVVQAVAVGARERVVVVDAAERRLVLGVTAQRVELIAELRRDDNAK