Protein Info for ABZR86_RS12790 in Dyella japonica UNC79MFTsu3.2
Annotation: 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 46% identical to HPPK_PSEAE: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (folK) from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
KEGG orthology group: K00950, 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC: 2.7.6.3] (inferred from 60% identity to sml:Smlt4031)Predicted SEED Role
"2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)" in subsystem Folate Biosynthesis (EC 2.7.6.3)
MetaCyc Pathways
- superpathway of tetrahydrofolate biosynthesis and salvage (10/12 steps found)
- superpathway of tetrahydrofolate biosynthesis (8/10 steps found)
- 6-hydroxymethyl-dihydropterin diphosphate biosynthesis IV (Plasmodium) (2/3 steps found)
- 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I (3/5 steps found)
- 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) (3/5 steps found)
- 6-hydroxymethyl-dihydropterin diphosphate biosynthesis V (Pyrococcus) (1/4 steps found)
- 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (Methanocaldococcus) (2/7 steps found)
- superpathway of chorismate metabolism (38/59 steps found)
- tetrahydromethanopterin biosynthesis (3/14 steps found)
KEGG Metabolic Maps
Isozymes
Compare fitness of predicted isozymes for: 2.7.6.3
Use Curated BLAST to search for 2.7.6.3
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A0A1I2EWQ2 at UniProt or InterPro
Protein Sequence (160 amino acids)
>ABZR86_RS12790 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase (Dyella japonica UNC79MFTsu3.2) MARVYLSLGSNLQPQRYLRAALDELRARFGAIEVSPAYRSKAVGFDGPDFVNLAVGLDTE LAPEALNEWLHALEDRHGRRRDVPRYADRTLDVDIVLYDDLVRQGAGHLDIPRKELQHAF VLRPIADIAPGLRHPVDGRSMAELWAAFPVASEPLTVEPL