Protein Info for ABZR86_RS12745 in Dyella japonica UNC79MFTsu3.2

Annotation: transglycosylase SLT domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 702 signal peptide" amino acids 1 to 30 (30 residues), see Phobius details PF14718: SLT_L" amino acids 422 to 482 (61 residues), 50.9 bits, see alignment 1.4e-17 PF01464: SLT" amino acids 503 to 610 (108 residues), 96.6 bits, see alignment E=7.6e-32

Best Hits

Predicted SEED Role

"Soluble lytic murein transglycosylase precursor (EC 3.2.1.-)" (EC 3.2.1.-)

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 3.2.1.-

Use Curated BLAST to search for 3.2.1.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2EZF5 at UniProt or InterPro

Protein Sequence (702 amino acids)

>ABZR86_RS12745 transglycosylase SLT domain-containing protein (Dyella japonica UNC79MFTsu3.2)
MPLHAAPRRLAHSLLALAAGLLLAGIAQAAEPTDAQRAAFKQAYATAQQGGDGWRALAQN
LSDYPLYPYLEAAALTHDLRQLDRAPVDAYLKRYAQLIPANDLRRDYLLELARRKDWATF
QSLYQPGLGDALTCDALQARLAQTQPSPAQSGPSAQGATLDFQRDLAALWNKPNLPNACD
PVIAAAHDQGLLTAPRLWERIDRAADANQPGTVAALAAWLPADDAQAAQRIALALRDPGG
AAAKAATWPDTPRSRQAAMLALERLARRQSGAADSSWEQLRGHFKFTPEQQRRVLSALAL
FHATDFNDDALQRLAALPPQAQTDATREWRVRVALAQQNWPAVLEAIDAMPAAQKQDGEW
RWFRARALGALNRDGDARRLLVSLADEPTFFGFLAADKLDVPYAICPLTLPPDPPREQAL
LANAGLQRAFELYAVGLPRQARREWVQALDGADAATQKLAADLAYRRGWYDRSVYAFNKG
EALRYYEQRFPLASQDGLVPQAAEAGIDPSWAYAILRAESAWMSDARSGANARGLMQLLP
DTAALVARRNGLNWGGAESLYDPITNIVLGTRYLAQMAARFNGAPWLASAAYNAGPGRVD
QWLAARGSLPPDLFVASMPFKETREYVARVMSFAVIYDWRLNGTATPLATRLTAIGDTYQ
LPDRNTPRRPVTCPAAAAAAAPADAATVAAPPANDAPNSSPR