Protein Info for ABZR86_RS12440 in Dyella japonica UNC79MFTsu3.2

Annotation: SGNH/GDSL hydrolase family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 198 PF00657: Lipase_GDSL" amino acids 4 to 188 (185 residues), 35.6 bits, see alignment E=1.1e-12 PF13472: Lipase_GDSL_2" amino acids 6 to 184 (179 residues), 85.5 bits, see alignment E=6.8e-28

Best Hits

KEGG orthology group: None (inferred from 64% identity to smt:Smal_3367)

Predicted SEED Role

"Lysophospholipase L1 and related esterases"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2JE41 at UniProt or InterPro

Protein Sequence (198 amino acids)

>ABZR86_RS12440 SGNH/GDSL hydrolase family protein (Dyella japonica UNC79MFTsu3.2)
MLAYLALGDSYTIGEGVPAEGRWPMRLAAALRMQGVALADPAILATTGWTTDELSAAMDA
AEFAPPYDLVSLLIGVNNQYRGRSADDYRGEFRRLLERAIALAGDRPGRTLVLSIPDWGV
TPFARDSGRDTARIAAELDAFNAIAGEESRRAGAAFVDIAPISREFPSLLAGDGLHPSAA
QYALWAEAALPVARRLLA