Protein Info for ABZR86_RS11975 in Dyella japonica UNC79MFTsu3.2

Annotation: UPF0149 family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 188 PF03695: UPF0149" amino acids 11 to 175 (165 residues), 122.6 bits, see alignment E=1.1e-39

Best Hits

Swiss-Prot: 46% identical to Y3260_XANCP: UPF0149 protein XCC3260 (XCC3260) from Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25)

KEGG orthology group: K09895, hypothetical protein (inferred from 46% identity to xcc:XCC3260)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2H0R1 at UniProt or InterPro

Protein Sequence (188 amino acids)

>ABZR86_RS11975 UPF0149 family protein (Dyella japonica UNC79MFTsu3.2)
MAPAELIGHEELDGVAARLKLAVDASELHGSLCGYLSGGGRVGRDALLSVLQLDGEEVSP
AANDRALLERLVQQSEQELADPELGFEPLLPAADRPLEERAESLGDWCRGFLGGFGLAGP
DKLGKLSDEAQEILRDLATIAASEFEFSDSRDDEDALIELHEFVRVAAMLLHAECVGGRN
KPNSDTVH