Protein Info for ABZR86_RS11605 in Dyella japonica UNC79MFTsu3.2

Annotation: non-ribosomal peptide synthetase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1341 PF00668: Condensation" amino acids 10 to 446 (437 residues), 233.3 bits, see alignment E=1.3e-72 PF00501: AMP-binding" amino acids 468 to 809 (342 residues), 266 bits, see alignment E=1.2e-82 TIGR01733: amino acid adenylation domain" amino acids 488 to 883 (396 residues), 418.3 bits, see alignment E=1.5e-129 PF13193: AMP-binding_C" amino acids 867 to 942 (76 residues), 44.2 bits, see alignment 7.7e-15 PF00550: PP-binding" amino acids 969 to 1032 (64 residues), 57.4 bits, see alignment 3.7e-19 PF00975: Thioesterase" amino acids 1064 to 1229 (166 residues), 88.1 bits, see alignment E=2.6e-28

Best Hits

Predicted SEED Role

"Siderophore biosynthesis non-ribosomal peptide synthetase modules @ Bacillibactin synthetase component F (EC 2.7.7.-)" (EC 2.7.7.-)

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.7.7.-

Use Curated BLAST to search for 2.7.7.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2HJ28 at UniProt or InterPro

Protein Sequence (1341 amino acids)

>ABZR86_RS11605 non-ribosomal peptide synthetase (Dyella japonica UNC79MFTsu3.2)
MTDVRDDVLLPLTTAQRGLWMNHKIGGDGAIMNIAEAVDIHGPVDPPLFRQALYRLVYEA
QMMRANVIERDGKPLLAIRQVYGGQFPYFDMSGEADPRAAAEAWMQEEYSRNPHLEHDPL
WVSVLFKLAADHYIWYQRAHHIVLDGHGGGLLARRLAELYTALVRGEEPPPCAFTPAATA
ITLENAYRESDRFRRDRDYWKELLAGLPEAVTLSRRQHRPGLADRLCRSTAYLSAETSRR
LGELGKATGASLPQVLIGLVAAYYHRVTGADDLVIGMPVTARLNADARQMPGIFVNVVPI
RLRFAADLTPGELFEQVARAVRQTLRHQQYRYEDMRRDLGLVGQGRSLAWLGVNIEPFDY
QLDFAGAGTSSHNMSNSSAEDLMIFVYDRGTDAGLRIDLDANPLLYDMPELDEHRRRLCR
LIEGVLVQPEARLQDLDLLGEEERQRVLVNWNETAAALDPRSLPALVAHQAALRPDAPAV
IHGDTVLSYRELHRRSVAQARQLLADGVAPGDIVAVALPRSEQLLVVLLAIMRSGATYLP
IDPDGPAERTALLLDDAAPIALIATRAIHDRLPMGGGLQLLPEQFDAAVLESTQEPDLSR
PDGVAYVLYTSGSTGRPKGVEVTHANLANFLQGMARLLEPAPGQRYLAVTTVIFDIAGLE
LYLPLTAGACVVMAGSGAAQQPLELARLIRDSGVTHAQATPSLWRILLAGAETRLENVHA
LVGGEALGAELAARLKAAAARVTQFYGPTETTVWSTAYELEEIGAGIPPIGRPILNTRLY
VLDAARRPVVTGATGELYIGGAGVAKGYLHRPQLTEERFLPDPFAADGSRMYATGDLVRW
RDDGLLEFVGRADSQVKIRGHRVELGEIENLLTQHAAIAAAAVTATRDGHGNMALAAYVV
PRDVDALDPDQLRVFLSRRLPEPALPSSFTVLDALPLTPNGKLDRRALPEPDRVARAAFV
EPGTPVERKLAELWQRLLRIERVGLHDNFFELGGDSLTAAEMAVGFPAEFGVELPLGSLF
EAPTVANLAAFVERSGGESDDPLGEVLALRAPPRLREVGKEAPRPLFCIHPMMGLSLGFT
ALLRHLDPTVPVYGLQSRGLRGDMRLPGSIEEIATDYLAQIRRIQPEGPYRLAGRSMGGL
IGHAIAEQLLAMGERVELLAMIDSYLFTAGERSRPREEAKEVRAALSFLGLHQHVGEHAP
QTLKELASLLLHSYNARSIPLVQEIIKSHPQFIEHLFAVMRNNLELARQYTPRRINLDLL
FFQATEREGSLDGILDHRPSAWRPFIGWRIEVHELACHHEAVLDAAPAEKIGSVLRHRLS
DIPDERMLSAPLAPQPGLAAA