Protein Info for ABZR86_RS11085 in Dyella japonica UNC79MFTsu3.2

Annotation: ATP-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 592 signal peptide" amino acids 1 to 27 (27 residues), see Phobius details transmembrane" amino acids 177 to 197 (21 residues), see Phobius details PF05227: CHASE3" amino acids 34 to 165 (132 residues), 32.2 bits, see alignment E=1.9e-11 PF00512: HisKA" amino acids 362 to 427 (66 residues), 48.2 bits, see alignment E=1.8e-16 PF02518: HATPase_c" amino acids 469 to 580 (112 residues), 87.7 bits, see alignment E=1.5e-28

Best Hits

Predicted SEED Role

"Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-)" in subsystem Oxidative stress or Oxygen and light sensor PpaA-PpsR (EC 2.7.3.-)

Isozymes

Compare fitness of predicted isozymes for: 2.7.3.-

Use Curated BLAST to search for 2.7.3.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2F852 at UniProt or InterPro

Protein Sequence (592 amino acids)

>ABZR86_RS11085 ATP-binding protein (Dyella japonica UNC79MFTsu3.2)
MRWRLGGLLFAVLVIVALPYMVTRSGSRDALEANARVTHSSEVKSLTYRIAYVTRDGEAA
LYRLLDGDDNPQVRVRAGRASKEIPGLLAQLRDMTRDNADQQARIGALGSMVSGRLALLD
QAMLHYRQGDVRAANEALRDSGTLFKMDDLIDGIVQSEDDTLLARRSQARAASSNSSLAL
TITATAQMLLLAIVVIVSERQISRRLQAEEREGQAVQRSQLIVQAVREPIALLDSKLCTL
LVNAAFGELYGIPPSNRHSLPLVEIGDGAWRDSALQQRLNDVLLLDRELWDYELLQRTVD
GVDRHVVINARRLQQDDGGEPVLLLTVSDVTARALVEQQVKELNRQLEGKVAQVSDVNRE
LEAFSYSVSHDLRAPLRHIAGFASKLEQHLGEGADDKSQHYIDVISDAARRMAQLIDDLL
VFSRLGRGALRLQPVDMQSLAEEARVLAESEVHGRRILWSIAPLPIVIGDENMLRTVWQN
LLGNAVKYTGKVEVAHIGVEMRRGDNGDYEFVVSDDGAGFDMQYSGKLFGVFQRLHRASE
FPGNGIGLANVRRIVQRHGGKVWAEGSPGEGARFHFTLPASDLADAFAQERQ