Protein Info for ABZR86_RS10950 in Dyella japonica UNC79MFTsu3.2

Annotation: glycoside hydrolase family 15 protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 613 PF19291: TREH_N" amino acids 27 to 161 (135 residues), 36.1 bits, see alignment E=4.3e-13 PF00723: Glyco_hydro_15" amino acids 241 to 602 (362 residues), 165.9 bits, see alignment E=1.5e-52

Best Hits

KEGG orthology group: None (inferred from 63% identity to smt:Smal_3154)

Predicted SEED Role

"Glucoamylase (EC 3.2.1.3)" in subsystem Maltose and Maltodextrin Utilization or Trehalose Biosynthesis (EC 3.2.1.3)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.2.1.3

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2FB05 at UniProt or InterPro

Protein Sequence (613 amino acids)

>ABZR86_RS10950 glycoside hydrolase family 15 protein (Dyella japonica UNC79MFTsu3.2)
MPESRARPDDTGPGDSNTRANAQTLALGVIGNGSIAALIDGMARIVWCCLPRFDSDASFC
ALLSPQREGGDWIIELEHVERAEQEYLPNTAVLVTRLYDRHDNAIEITDFAPRHRSRGRF
YHPVMLARRIRPIQGKPRIRILLRPLCDYGARAPETTSGSNHLRFLLSDVIQRLTTDVAV
PLIERGLFFHLDRPAHLVFGPDETLVTSPADFIHSSLEYTIAYWRDWVRYLSIPYEWQEP
VIRAAITLKLCQYEATGAIIAALTTSIPEAPGTRRNWDYRYCWLRDAAFVVRALNRLGAT
RSMEEYIRYVFNIFSAEGDHEVGPVFGITFERELPEREAAGLDGYRGMGPVRIGNDAWRQ
RQNDVYGSVVLASAQLFFDQRLENRGDARTFQRLESMGRMALRMAEEPDAGLWEFRGRAA
VHTYSAAMCWAACDRLAHIATELGLKDRARYWHDEAVALHERISKRIWNERLGHFVDAYD
GEHLDASLLLLADIGFVRGRDPRFIATVDAIGKALGRGDYLFRYIAPDDFGAPETSFNIC
TFWYIEALAATGRKRRARLMFEHMLAQRNPLGLLSEDIAPGTGEHWGNFPQTYSLVGLIQ
TAMRLSRRWEDEL