Protein Info for ABZR86_RS10340 in Dyella japonica UNC79MFTsu3.2

Annotation: chemotaxis protein CheB

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 588 PF01339: CheB_methylest" amino acids 406 to 580 (175 residues), 95.4 bits, see alignment E=1.7e-31

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2FMF2 at UniProt or InterPro

Protein Sequence (588 amino acids)

>ABZR86_RS10340 chemotaxis protein CheB (Dyella japonica UNC79MFTsu3.2)
MAEAPAVALLFDDAELGAHLREALRERGARIVHEGALGTLSREVIHGTGAQVVVVNLDDE
AADELDRLYDVIDGDHPRVVFNDAQASRGLDGWDRARWARHLAVKVLADGDVDPPRPADA
LAVETPVMHEAVAVAAAPVAAIAAVALAEADEEPAAEPEATTLAEIEPVADIALIDESPE
ILLSPVVGEAADVSESLAAELEALLAADTDEPAEDDFGSGLKQIAEDAPPLHDGMFGADF
LADTHGPAPMPPVHDELLAQLPPPLPQREELTASVPTEPLGAPPSAPRPSFQLDHLALTP
LDDDFIPADAPIKVEKMSTAEALHSGWSLVDDDAPLAEEATVDFGIEKMDAADFLAPDVE
LEEAPMAEPTMTLELVSIEEAIAPREEYSHEVHLGELNSALGRVLLLGATVDSTDSVCAF
LAALPSSLRMAVLLTQHQGVASVDALSERLSKHSALPVRIASHGHRARAGEVLLVPANCQ
VRLLRDGRIESEAVELASLQNPSIDSAFTTAASVFGRDAVAIVFAGPGTDAVAGAQAVHD
RGGKVWVEQASGDHYADMVHGVEAERLASFTGTPFELAARLIEEEVQR