Protein Info for ABZR86_RS10330 in Dyella japonica UNC79MFTsu3.2

Annotation: DUF6531 domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 535 signal peptide" amino acids 1 to 22 (22 residues), see Phobius details TIGR01643: YD repeat (two copies)" amino acids 399 to 436 (38 residues), 20.8 bits, see alignment 2.1e-08 PF05593: RHS_repeat" amino acids 406 to 435 (30 residues), 29.1 bits, see alignment (E = 1.1e-10)

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2FKM0 at UniProt or InterPro

Protein Sequence (535 amino acids)

>ABZR86_RS10330 DUF6531 domain-containing protein (Dyella japonica UNC79MFTsu3.2)
MKYGITVALLLLLSLLGSVSAQDWNAVHLGNNVIDPDNRVMWSEGAAMTYDFGAVYSGYP
YGRDKCSPTGWQTMSAPNTAYNPAAHRYQRQMVAYSDCHMLGAFIVASYLVYSCDNAAKW
SYLKDYNTWDCARGYYVAVPEDPAGNGECTCDQGRQATAHPIEIGTGNMSESATDFVSGD
GRLRFDRYYNSNPLNPDRRASGWWNAYSARHITSLDAGRKSSRSAIHYAASSGVYASAEQ
ACVLGVADLANDRGANAANPAYAGVTGSYVDGRCQLSNGGSVPVLNTGTADLFVGIILDA
SVGATVFRPDGNYYQFSCRQGVCTSFGQSKITLVTSSAGYTLTAENGDVESYDFNGNLQK
IVSRDGYMQTLTYNTSSNTDVATIQSVTDSSGRTLAFAYNVFGSLSQLTLPDGTAVQYGY
EADGRLTSVTYADGSSIGYKYENTAFPQAMTAWVDESGGTYATWAYDNTTGMATASALAG
NVDTSTLSYSGNTTTLTDNLGTARTYTFQGVARGSRLLSVSGAHLQRLHRSEHDL