Protein Info for ABZR86_RS09290 in Dyella japonica UNC79MFTsu3.2

Annotation: M28 family peptidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 548 signal peptide" amino acids 1 to 24 (24 residues), see Phobius details PF04389: Peptidase_M28" amino acids 304 to 481 (178 residues), 97 bits, see alignment E=6.3e-32

Best Hits

KEGG orthology group: None (inferred from 45% identity to smt:Smal_0301)

Predicted SEED Role

"peptidase, M20/M25/M40 family"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2I5H6 at UniProt or InterPro

Protein Sequence (548 amino acids)

>ABZR86_RS09290 M28 family peptidase (Dyella japonica UNC79MFTsu3.2)
MRRLVSAVVMSVMLAACQHHSSSRDNEVSAHFSPGIMPEDLAVHFHALSAPELRDRSPGS
AGERHTVDYLIAQFQRMGLQPGLDDQWTQDVPYVRSAVVHPERMTLQIDGGAQPLSLAYG
IDMVANSPANQAHAAIEHAAMVFAGYGIDDPAQDWDDYAGIDVKGKTVVVLANDPGWGSQ
DASLFQGRTPTLFGSWRYKLEQAARHGAAALFVVHDEAASGFAWNTVRQRWGGPWYGLPG
DAATATPIAGWLSDGAARKLFASVGQDFQALRAAAHRRGFHAVPLAANASLAFDSTVSRG
VSPNVIARLPGSKHADEAVVYAAHWNHPDARDSQSLHGVAESAAGLAGLLELAEAFAHRA
PKPHRSLLFVALTMEESGQLGSRWYVDHPAVSMEHTVAEIQLDALPWIGPSRDLDVLGYG
QSQLDDYLAEALHSQHRNMGSGDELAGMQLFRSDALSFATRGVPVLYARSGLDLRDGGDA
AGRKRYDDYLAASDVVPPADAAPTWDLRGLVDDLRALFMVGGKLSMETAYPQWKPMASFH
RPVTVVAR