Protein Info for ABZR86_RS09200 in Dyella japonica UNC79MFTsu3.2

Annotation: PilX N-terminal domain-containing pilus assembly protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 221 signal peptide" amino acids 1 to 41 (41 residues), see Phobius details PF14341: PilX_N" amino acids 17 to 64 (48 residues), 32 bits, see alignment 9.8e-12 PF13681: PilX" amino acids 117 to 217 (101 residues), 49.9 bits, see alignment E=3.7e-17

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2D828 at UniProt or InterPro

Protein Sequence (221 amino acids)

>ABZR86_RS09200 PilX N-terminal domain-containing pilus assembly protein (Dyella japonica UNC79MFTsu3.2)
MMYAHSGRRLPRAHQQRGVVLIVALIFLVLLTILALSASGRSLLQERMAGGLRNTSLADM
AAETTLRGVEWKLWTSTTKLTSTPLLCGSGVLAGNCYRYDPSNTALYGSTGTVTKFRNGT
GWITAGAATYQGSDSGTNFTALSGTAKTGALASNPVYIIEDMGVELPPGASGGLHESGAT
GSGSGGTGSTSRHVYRITARATGADSNTVRVMESTFAAKSN