Protein Info for ABZR86_RS08805 in Dyella japonica UNC79MFTsu3.2

Annotation: EAL domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 683 TIGR00229: PAS domain S-box protein" amino acids 140 to 232 (93 residues), 26 bits, see alignment E=8.3e-10 TIGR00254: diguanylate cyclase (GGDEF) domain" amino acids 263 to 424 (162 residues), 52.6 bits, see alignment E=4.5e-18 PF00990: GGDEF" amino acids 266 to 421 (156 residues), 66.9 bits, see alignment E=1.9e-22 PF00563: EAL" amino acids 444 to 676 (233 residues), 181.3 bits, see alignment E=2.1e-57

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2DG10 at UniProt or InterPro

Protein Sequence (683 amino acids)

>ABZR86_RS08805 EAL domain-containing protein (Dyella japonica UNC79MFTsu3.2)
MKTDSVIKILFIEKSVEDAEQIVSLLRNNGIAVRPARATNAEQVQAALDDLGPDVVLYDP
AVGTVTLPDLLHQLDANGRDLSVIAVVPQVDNTIVSDFFINGVRAIALRPQPKQLLAVVQ
REFEALNTRRQLRRLETALRESERRCDALLDSSTDAIAYVHEGMHVRANQAYLDTFGYAE
FDDLLGLPVLDMIGSTQAEDFKATLKSLSRGEKPSGPMELQARRADASTFKAMVEFAHAT
FEGEPCVQIVFRRQQVDPSVLEQLQRDPVTGLFNRARMLECIDQAVAAATEGTKGQSLLL
IEPDNWQAIVSGIGLGKADELLAAFAARINALLGLEDTAGLLAEHTVGVILHSRNDDGIK
EWIAGLQQAVANEIFDVGSRSLTVTTSIGGSLLGEKNANTELLLEQAGQSLRNAQSLGGN
RYDLHDPAAREKADAERERYWLGQLKQALSQDEFVLYHQHIISLQDAEGEFSEILLRLNG
PQGEVLPGFFMPIAEKYNLTPAIDRWVVNQAIQALSSRERLASPTTFFVKLTAGSLHDEQ
LIPWLTARLKQANLKHGKIVLEMTESKVVTSLRPAQVFVRAWRQLGGQFALEQFGSGLNS
FQLLTHIDADYLKIDRSYMSSLPQQPDSQKKVAELCRQAREIKRLTIAEWVEDAASTSLL
FACGVDFVQGNFLQEPQRLAITP