Protein Info for ABZR86_RS08390 in Dyella japonica UNC79MFTsu3.2

Annotation: DUF748 domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1220 transmembrane" amino acids 32 to 53 (22 residues), see Phobius details PF05170: AsmA" amino acids 31 to 198 (168 residues), 47.8 bits, see alignment E=1e-16 PF05359: DUF748" amino acids 164 to 310 (147 residues), 84.7 bits, see alignment E=8e-28 amino acids 373 to 519 (147 residues), 62.2 bits, see alignment E=6.6e-21 amino acids 584 to 736 (153 residues), 97.6 bits, see alignment E=8.3e-32 amino acids 823 to 966 (144 residues), 108.3 bits, see alignment E=4.3e-35

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2DQ65 at UniProt or InterPro

Protein Sequence (1220 amino acids)

>ABZR86_RS08390 DUF748 domain-containing protein (Dyella japonica UNC79MFTsu3.2)
MADQVSSGSSRLAAAQTRALAVYRSRRARKTALIVAIVLVLFGLFGFLAAPSIIRGQIEK
RASAALDRPVTLGKVHLNPYTLRLQLDQLHIGERDGKTGFVDVEQIVANTSWSTLFRLAP
VLDELSLQQPRIHIARTADQRFNFSDIIDRYASQPAEPDAKPARFALSNISVHGGDIVFD
DQAAKATHHVEQLELGIPFLANLPSSTDVFVKPLLALKVDGSPLRIEGQTKPFASNRESA
IGFQLDRLDLPRYLGYVPKPLPVAIPKGLLSGKLELNFVQTPEAPQVRLTGNLQLDDFAL
DSSKGEPIARLGHGTAELADVQPLVSRYQLGALKLEQAQVYYTASEGGHSNYDTLTAPSA
PADPAKKAAPTDLRIASIALTGSAIHYTDATQNKLDLANLRGSLLGLSMLAAPPARLDLA
GQLFGGDIGAKGTLDLAAAKLNAALALKQVDMVPLQAMAGSAMAARAAKGKLDANGQLEL
DWGKTTNVHLAPAQATVTDFALAADGKNQAAPVAWNKLQADIEQIDLASRQARLKSLVGT
GLSLDVQRAVNGNISLTELFAPPKTTAKTAPRAKAKPTDAEPAWQWSIAHLAVEDGAVRF
ADHAVGNGKPAVVEVKSLKGGIDELSDKFNQQRAMKLDGAIGKGSFSLAGKVQPSPALAD
LDLTTRGLDIATFAPYISVPLNVTISSARLSGKGKLLYDGRGKEAKFGFKGNAALERVRV
QDKVTGDDFLRWSALNAGNLDVAYGSGTPRMHVGSLVLSAFYARMIVNANGRLNLADVVA
KPEQEEPVSVTRAEANAPAAPKVSKTTTETEKPTESIAPAADIQLGQITLLNGQLNYTDN
FIKPNYTANLTKVTGKIGAFGTAGGPPAEVAVQAQLDDSSPVDISGTMNPLAPVAFLDIQ
GKANEVELTRLSAYSSKYTGYPITAGKLSVDVKYNLDQRKLKADNHIYITQLTFGDRIEA
PGISHLPVKLAVALLKDTQGNIDVNVPVSGSLDDPQFSMGGLIWRAIGNLIVKAVTSPFR
LLGSAFGGSNHEDLGYVEFDPGSAVLNAAAQERLGKVVAMLNQKTALTLDIVGRTDPAQD
QNGLRKVTVEDMVRKEKVLDDNGKNADTSPAALAAVAITPDQEERYLARAYKHAEDIDKP
RNALGLKKSLEPDEMRALLETNVKTDDAAMRDLAERRANAVRDWLKGKLPDNRYGMKDPK
LTPEGIDDKGKTTRVDFGLH