Protein Info for ABZR86_RS08240 in Dyella japonica UNC79MFTsu3.2

Annotation: phosphate ABC transporter permease PstA

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 290 transmembrane" amino acids 12 to 37 (26 residues), see Phobius details amino acids 69 to 93 (25 residues), see Phobius details amino acids 110 to 131 (22 residues), see Phobius details amino acids 142 to 161 (20 residues), see Phobius details amino acids 201 to 225 (25 residues), see Phobius details amino acids 258 to 281 (24 residues), see Phobius details TIGR00974: phosphate ABC transporter, permease protein PstA" amino acids 17 to 285 (269 residues), 270.1 bits, see alignment E=9e-85 PF00528: BPD_transp_1" amino acids 86 to 284 (199 residues), 65 bits, see alignment E=4e-22

Best Hits

Swiss-Prot: 53% identical to PSTA_XYLFA: Phosphate transport system permease protein PstA (pstA) from Xylella fastidiosa (strain 9a5c)

KEGG orthology group: K02038, phosphate transport system permease protein (inferred from 57% identity to psu:Psesu_0933)

Predicted SEED Role

"Phosphate transport system permease protein PstA (TC 3.A.1.7.1)" in subsystem High affinity phosphate transporter and control of PHO regulon or Phosphate metabolism (TC 3.A.1.7.1)

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2DU55 at UniProt or InterPro

Protein Sequence (290 amino acids)

>ABZR86_RS08240 phosphate ABC transporter permease PstA (Dyella japonica UNC79MFTsu3.2)
MKSSSLYLRRRIKNVVALGLSSVATLIGLIFLAWILWETLRQGIGAINWNLFSKISVYRE
NGGLANAMVGSLILDLLGIAIATPIGVLAGTWLAEYANRTKLGETIRFLNDILLSAPSIV
LGLFVYTIVVLPTTALTHGDTTFSGLAGGIALALIALPVIVRTTDEMLRLVPSTLREAAL
SLGIPQWKLTLQILIRASRSGIITGVLLALARISGETAPLLFTAFGNNFLTFNPMDKMPS
LPQAIYEYTKDPDPAINAIAWAGAFVVTMFVLALSLISRLILSRNKVSHD