Protein Info for ABZR86_RS07890 in Dyella japonica UNC79MFTsu3.2

Annotation: MerC domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 140 transmembrane" amino acids 20 to 43 (24 residues), see Phobius details amino acids 53 to 71 (19 residues), see Phobius details amino acids 78 to 97 (20 residues), see Phobius details amino acids 102 to 122 (21 residues), see Phobius details PF03203: MerC" amino acids 14 to 125 (112 residues), 102.5 bits, see alignment E=1e-33

Best Hits

KEGG orthology group: None (inferred from 45% identity to xal:XALc_2060)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2DZ49 at UniProt or InterPro

Protein Sequence (140 amino acids)

>ABZR86_RS07890 MerC domain-containing protein (Dyella japonica UNC79MFTsu3.2)
MDQESKTRWWRIADRIGATASFLCAIHCAALPFVLALLPLLGLGFLADHRFERAFVLFAC
VLALVSLLSGYRRHRRMLPLRLALPGLALLLLGVTVAEGYSIGVHSALVTCGGLLVAAAH
FINLRADREQGHVHSVDCAH