Protein Info for ABZR86_RS07865 in Dyella japonica UNC79MFTsu3.2

Annotation: chloride channel protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 468 signal peptide" amino acids 1 to 36 (36 residues), see Phobius details transmembrane" amino acids 51 to 73 (23 residues), see Phobius details amino acids 102 to 122 (21 residues), see Phobius details amino acids 154 to 178 (25 residues), see Phobius details amino acids 190 to 214 (25 residues), see Phobius details amino acids 226 to 246 (21 residues), see Phobius details amino acids 266 to 285 (20 residues), see Phobius details amino acids 321 to 341 (21 residues), see Phobius details amino acids 348 to 369 (22 residues), see Phobius details amino acids 390 to 409 (20 residues), see Phobius details PF00654: Voltage_CLC" amino acids 62 to 405 (344 residues), 269.6 bits, see alignment E=2.2e-84

Best Hits

KEGG orthology group: None (inferred from 60% identity to sml:Smlt4458)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2DZ54 at UniProt or InterPro

Protein Sequence (468 amino acids)

>ABZR86_RS07865 chloride channel protein (Dyella japonica UNC79MFTsu3.2)
MADSGLFSPVQWRRRVLFWTGAVVVGLAAVGFAQAADYAYGLFHRMAEHSRWSAFLVTPA
MFALLAWLTAGALKPTRGSGIPQAIAALKVEDEGFRTSLLSLRVALGKMALTLAALLGGA
SVGREGPTVHVGAGLLYSLGRRFGFADAAAAGRFILAGAAAGLAAAFNTPLAGVVFAIEE
MSGAFEHRMSGILLTAVIIAGVVSLGILGNYAYFGRLDIGLPLGRAWWAVLATGIGCGLA
GGLFARLILPHDRGLRGAMGRIRARYPVLFAAGCGLALVLLSQLTHTGLYGTGYAQAKAI
LEGQHETVSSFGALKFLGNIASYWAGIPGGIFSPALAVGAGLGDNIAALVPGADASAVVL
LAMAAYLSGVTQAPLTATVISMELTANQQMALPIMATCLLARAASSLLCRKPVYRALADR
LIEGYELELARREVPAPSSGIAESESPLVEDPATPMPTDLPSDKREPT