Protein Info for ABZR86_RS07825 in Dyella japonica UNC79MFTsu3.2

Annotation: heme-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 140 PF03928: HbpS-like" amino acids 11 to 135 (125 residues), 114 bits, see alignment E=2.4e-37

Best Hits

Swiss-Prot: 35% identical to YDHY_CITFR: Uncharacterized 15.0 kDa protein in dhaT-dhaS intergenic region from Citrobacter freundii

KEGG orthology group: None (inferred from 51% identity to lic:LIC10294)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2DZ98 at UniProt or InterPro

Protein Sequence (140 amino acids)

>ABZR86_RS07825 heme-binding protein (Dyella japonica UNC79MFTsu3.2)
MSRPPSYGAPITLDEAARVMAAAQAEARRNDWPMAIAIVGSGGHLVMLHALDDVQHASIT
VAQAKAATAVNFRRPSKLFEDAVRDGGLGLRLLGMDNLLPLDGGLPLYRDGKVAGAIGVS
GMQSTQDAQVAATGATLMPV