Protein Info for ABZR86_RS07785 in Dyella japonica UNC79MFTsu3.2

Annotation: MFS transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 419 transmembrane" amino acids 25 to 46 (22 residues), see Phobius details amino acids 58 to 78 (21 residues), see Phobius details amino acids 90 to 108 (19 residues), see Phobius details amino acids 115 to 136 (22 residues), see Phobius details amino acids 147 to 167 (21 residues), see Phobius details amino acids 174 to 195 (22 residues), see Phobius details amino acids 227 to 248 (22 residues), see Phobius details amino acids 260 to 281 (22 residues), see Phobius details amino acids 293 to 310 (18 residues), see Phobius details amino acids 316 to 338 (23 residues), see Phobius details amino acids 352 to 373 (22 residues), see Phobius details amino acids 379 to 398 (20 residues), see Phobius details PF07690: MFS_1" amino acids 28 to 248 (221 residues), 93.1 bits, see alignment E=1.7e-30 amino acids 237 to 410 (174 residues), 43.2 bits, see alignment E=2.6e-15 PF00083: Sugar_tr" amino acids 64 to 196 (133 residues), 23.7 bits, see alignment E=2.1e-09

Best Hits

Swiss-Prot: 50% identical to YNFM_ECOLI: Inner membrane transport protein YnfM (ynfM) from Escherichia coli (strain K12)

KEGG orthology group: K08224, MFS transporter, YNFM family, putative membrane transport protein (inferred from 58% identity to pfl:PFL_0456)

Predicted SEED Role

"Permeases of the major facilitator superfamily"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2E0I7 at UniProt or InterPro

Protein Sequence (419 amino acids)

>ABZR86_RS07785 MFS transporter (Dyella japonica UNC79MFTsu3.2)
MQVQAATSAGDEYIRHGTPLFRRTNFALFAAGIATFGLLYCVQPLMPEFSKDFGVNAAGA
ALSLSVTTGVLAVAMLVAGAVSDAVGRKSVMTVSLLASSLLVLATALVRDWHTLLVLRTL
LGLTLSGLPAVAMTYLSEEMHPDSIGLGMGLYISGNAIGGMGGRLVAGVMADFVGWRAGV
GAVGAIGLVAGLVFWRSLPPSRHFTLQPFHWKTLQQRFAGAFRDAGLPWLFAEGFLLLGA
FVTVYNFIGYRLLAPPYGLSQAVVGLIFSVYLIGTFSSAWMGHLAGKLGRRKVLWTAFAL
MLAGVLLTMTAPLALIVLGIVAITFGFFGGHSIASSWVGRRAGVAKAQASSMYLFAYYMG
SSLAGAGCGLFYASHGWNGVAAFVGALVLAGLLIAWRLRHLQPLPGPPSKGDEPPLAEL