Protein Info for ABZR86_RS07620 in Dyella japonica UNC79MFTsu3.2

Annotation: cytochrome o ubiquinol oxidase subunit I

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 667 transmembrane" amino acids 26 to 46 (21 residues), see Phobius details amino acids 67 to 89 (23 residues), see Phobius details amino acids 113 to 136 (24 residues), see Phobius details amino acids 154 to 174 (21 residues), see Phobius details amino acids 200 to 223 (24 residues), see Phobius details amino acids 237 to 263 (27 residues), see Phobius details amino acids 285 to 308 (24 residues), see Phobius details amino acids 320 to 342 (23 residues), see Phobius details amino acids 356 to 378 (23 residues), see Phobius details amino acids 390 to 413 (24 residues), see Phobius details amino acids 425 to 449 (25 residues), see Phobius details amino acids 466 to 485 (20 residues), see Phobius details amino acids 503 to 528 (26 residues), see Phobius details amino acids 598 to 617 (20 residues), see Phobius details amino acids 621 to 640 (20 residues), see Phobius details TIGR02843: cytochrome o ubiquinol oxidase, subunit I" amino acids 12 to 656 (645 residues), 1114.7 bits, see alignment E=0 PF00115: COX1" amino acids 66 to 514 (449 residues), 490.6 bits, see alignment E=2.1e-151

Best Hits

Swiss-Prot: 65% identical to CYOB_ECOL6: Cytochrome bo(3) ubiquinol oxidase subunit 1 (cyoB) from Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)

KEGG orthology group: K02298, cytochrome o ubiquinol oxidase subunit I [EC: 1.10.3.-] (inferred from 83% identity to mms:mma_2639)

MetaCyc: 65% identical to cytochrome bo3 subunit 1 (Escherichia coli K-12 substr. MG1655)
RXN-21817 [EC: 7.1.1.3]

Predicted SEED Role

"Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-)" in subsystem Terminal cytochrome O ubiquinol oxidase or Terminal cytochrome oxidases (EC 1.10.3.-)

MetaCyc Pathways

Isozymes

Compare fitness of predicted isozymes for: 1.10.3.-

Use Curated BLAST to search for 1.10.3.- or 7.1.1.3

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2FSF6 at UniProt or InterPro

Protein Sequence (667 amino acids)

>ABZR86_RS07620 cytochrome o ubiquinol oxidase subunit I (Dyella japonica UNC79MFTsu3.2)
MSDHPDLTKLIFGRLSWDAIPFHEPILLATFAAVLVGGLVLLGLITKYRLWGYLWHEWFT
SIDHKKIGIMYMVLGLVMLLRGFADAIMMRLQQAISFGDNLGYLPPHHYDQVFTAHGVIM
IFFVAMPIVTGLMNYIVPLQIGARDVAFPFLNNFSFWMTTSGAVLVMASLFVGEFARTGW
LAYPPLSGILASPDVGVDYYIWSLQIAGVGTLLSGVNLLVTIIKMRAPGMKLMQMPVFTW
TALCTNVLIIAAFPVLTAVLALLSMDRYLGTHMFTNELGGNAMMYVNLIWIWGHPEVYIL
ILPMFGVFSEVVSTFAGKRLFGYTSMVYATIVITVLSYLVWLHHFFTMGSGASVNSFFGI
TTMIISIPTGAKIFNWLFTMYRGRIRFELPMMWVVAFMVTFVIGGMTGVLLAVPPADFSL
HNSLFLIAHFHNVIIGGVLFGAFAAINFWFPKAFGFRLDPFWGKCSFWLWVVGFYFAFMP
LYVLGLMGVTRRISHFEDPSLQIWFQIAAFGAVLIALGIGAMLIQFVVSFLRREQLRDVT
GDPWGGRTLEWSTSSPPPAYNFAFTPVVHDGDAWWQMKRLGWQRPLAGFIDIHMPKNTGA
GIILAGISTVLGFAMIWQMWLLAALAFVSLLAVAIGHTFNYNREYYIQAADVARVEAART
EQLASHV