Protein Info for ABZR86_RS07335 in Dyella japonica UNC79MFTsu3.2

Annotation: trigger factor

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 430 PF05697: Trigger_N" amino acids 1 to 144 (144 residues), 141.8 bits, see alignment E=2.9e-45 TIGR00115: trigger factor" amino acids 11 to 408 (398 residues), 341.4 bits, see alignment E=3.6e-106 PF05698: Trigger_C" amino acids 263 to 409 (147 residues), 85.4 bits, see alignment E=7.1e-28

Best Hits

Swiss-Prot: 36% identical to TIG_MARHV: Trigger factor (tig) from Marinobacter hydrocarbonoclasticus (strain ATCC 700491 / DSM 11845 / VT8)

KEGG orthology group: K03545, trigger factor (inferred from 48% identity to xal:XALc_0586)

Predicted SEED Role

"Cell division trigger factor (EC 5.2.1.8)" in subsystem Bacterial Cell Division (EC 5.2.1.8)

Isozymes

Compare fitness of predicted isozymes for: 5.2.1.8

Use Curated BLAST to search for 5.2.1.8

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2FWD5 at UniProt or InterPro

Protein Sequence (430 amino acids)

>ABZR86_RS07335 trigger factor (Dyella japonica UNC79MFTsu3.2)
MQVSVENVGKLERKLTVKFPAERFESQVSARIAEMGRTVRLKGFRPGKVPTTVIQQRFGA
QVRGEVLSDLIGSTLREAVNQENLRPVANPSVDTTGQPENGEITYTATFEIMPEFPDVDV
AALEIKRPVAEVTDADIEKMIETLRAQRRSFDDVARASAEGDFVMFEYSAVAGDYRFPAE
GLERAGSVIGSGTLFKALDEALTGRSAGDEFETDVDFPADFRNESLAGKTAKVAFKIVKV
QEPRLPTVDAEFAKLFGIVDGDLEQFRKEVRNNLERELKATLMARLKSQVAEKLADANDG
LDVPKIMVQSEAHNLAAGSVPRGQQPPPQLVEAATPMARKRVIAGLLMSEIARKQELKLD
RTRLAEQLAAIASTYEEPEKVIELYNSDPQLMSGLQNRVMEDQVAVWVADNAKTTDENLS
FDEVMRPVSA