Protein Info for ABZR86_RS06585 in Dyella japonica UNC79MFTsu3.2

Annotation: YqaA family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 202 transmembrane" amino acids 20 to 43 (24 residues), see Phobius details amino acids 54 to 76 (23 residues), see Phobius details amino acids 78 to 80 (3 residues), see Phobius details amino acids 109 to 127 (19 residues), see Phobius details amino acids 133 to 153 (21 residues), see Phobius details amino acids 183 to 200 (18 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 50% identity to sml:Smlt1723)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I1Y744 at UniProt or InterPro

Protein Sequence (202 amino acids)

>ABZR86_RS06585 YqaA family protein (Dyella japonica UNC79MFTsu3.2)
MRLFGTLYARALTWARHPRAVYYLCGLSFVEAFIFPIMPEVMLAPMMLGKRHKAFFYANL
SLLFSLLGSLVGYALGHWAFQALHPVLEALHLLAPIEQGVESLRAQMNTHWLGLLLVLAL
AALQPVVPMKFVTWAAGIVGVPIIPFLVCMAVGRGKRVWLLALLIRIFGERAERVLHKHI
ERIGWAAVVILVGLLAWWLLRH