Protein Info for ABZR86_RS06360 in Dyella japonica UNC79MFTsu3.2

Annotation: cell wall hydrolase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 144 signal peptide" amino acids 1 to 19 (19 residues), see Phobius details PF07486: Hydrolase_2" amino acids 34 to 141 (108 residues), 53.9 bits, see alignment E=1.2e-18

Best Hits

KEGG orthology group: None (inferred from 54% identity to sml:Smlt0951)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I1Y8I2 at UniProt or InterPro

Protein Sequence (144 amino acids)

>ABZR86_RS06360 cell wall hydrolase (Dyella japonica UNC79MFTsu3.2)
MKLSMLLWLASVLPQPLADQTCLATTVYLEARSESTIGQFAVAEVALRRRDRGTWGKNVC
EVVTAPRQFATTTTASTFEVTDLAAWSKAWKVAGDSIVNWSLPMNERMVYVPHADHFATT
SVAPAWSTSRVVRTIGEHAFYAVN