Protein Info for ABZR86_RS05800 in Dyella japonica UNC79MFTsu3.2

Annotation: VOC family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 209 PF00903: Glyoxalase" amino acids 70 to 202 (133 residues), 37.4 bits, see alignment E=3.1e-13 PF13669: Glyoxalase_4" amino acids 73 to 192 (120 residues), 34.8 bits, see alignment E=1.8e-12

Best Hits

Predicted SEED Role

"Glyoxalase family protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (209 amino acids)

>ABZR86_RS05800 VOC family protein (Dyella japonica UNC79MFTsu3.2)
MELQSSSGTRRASCSPAMHAEKAAGGAQLRNRWGRLMFIHLQSPHLTHGYPAAFRQLTSL
GSGHVALKRMDNVGIVIEDLDTTIAFFRELGLNLEGRAMIKGAWAGRVTGLGDQQVEIAM
MSTPDGHSRLELSRFLRPSVAADHRNAPVNALGYLRVMFTVDDLDETLARLRRHGAQLVG
EVVDYQDVYRLCYIRGPEGLLIGLAQELG