Protein Info for ABZR86_RS04860 in Dyella japonica UNC79MFTsu3.2

Annotation: CocE/NonD family hydrolase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 659 signal peptide" amino acids 1 to 30 (30 residues), see Phobius details TIGR00976: hydrolase CocE/NonD family protein" amino acids 59 to 184 (126 residues), 105.4 bits, see alignment E=2.1e-34 amino acids 301 to 652 (352 residues), 218.7 bits, see alignment E=9.6e-69 PF02129: Peptidase_S15" amino acids 63 to 361 (299 residues), 114.1 bits, see alignment E=9.6e-37 PF08530: PepX_C" amino acids 407 to 646 (240 residues), 169.1 bits, see alignment E=1.5e-53

Best Hits

KEGG orthology group: K06978, (no description) (inferred from 65% identity to sus:Acid_1582)

Predicted SEED Role

"hydrolase, CocE/NonD family"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I1XBH1 at UniProt or InterPro

Protein Sequence (659 amino acids)

>ABZR86_RS04860 CocE/NonD family hydrolase (Dyella japonica UNC79MFTsu3.2)
MLRKHLPTILGGMAASFCLALPFAAAAQAKDPQAEQIAKRNATEKSLEEVAVVDRKVMVK
MRDGKRMAADIYRPKGAGKVPTIFSRTPYNFNYWDVKLGAPRDMTRALDAVKHGYAYVEM
NERGHFFSEGNYDILGAPVTDGVDAVRWISSQPWSSGKVGTTGCSSTAEWQMAVVAQNEP
ALATFNVQGFGAGVGRVGPYYEQGNWYRGGAVQMLFIAWIYDYGIQNQVRPNFPAGTTQA
ELVNASRYFDLAPQMPPVDWDKAFWHLPEQDIIKAVNGPPGIFETRMPVATGGNMIARAP
NDPAWYKGGLWHDNLKIAKPGLWFMSWFDVSVSPNLAAYNEVRRTAPKAVADEQYAVIAP
VLHCAYTRAAEHTMVGDMDMGDARYDYNALVFGWFDRFLKGEDSDVVKKQPKVMYYLMGK
NEWKKSPTWPPAGATTREFYFASGGKANTLYGDGKLVAQAPADDHPDQFVYDPANPVMTY
GGGGCCQGNAVKFGSYDQRKEETRNDVLVYDTEPFAQGTEVSGPITVTLHVSSSAKDTDF
TFKVIDVQPDGQAFNITENIQRMRYRNGYDKPLAWMKPGEVYPVTFQPIDTSYYFKPGHK
LRIAVSSSNFPRFDRNLNTGGNNFDEAAGVIANNAVHHGGAYPSKIVLTVVPETKAAAD