Protein Info for ABZR86_RS04605 in Dyella japonica UNC79MFTsu3.2

Annotation: TonB-dependent hemoglobin/transferrin/lactoferrin family receptor

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 763 signal peptide" amino acids 1 to 22 (22 residues), see Phobius details TIGR01785: TonB-dependent heme/hemoglobin receptor family protein" amino acids 47 to 763 (717 residues), 327 bits, see alignment E=2.6e-101 TIGR01786: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein" amino acids 48 to 763 (716 residues), 376.4 bits, see alignment E=3e-116 PF07715: Plug" amino acids 48 to 159 (112 residues), 84.8 bits, see alignment E=5.8e-28 PF00593: TonB_dep_Rec" amino acids 258 to 710 (453 residues), 156.3 bits, see alignment E=2.4e-49

Best Hits

Predicted SEED Role

"TonB-dependent hemin , ferrichrome receptor" in subsystem Hemin transport system or Ton and Tol transport systems

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I1X6Z1 at UniProt or InterPro

Protein Sequence (763 amino acids)

>ABZR86_RS04605 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor (Dyella japonica UNC79MFTsu3.2)
MFRIAPLAAVIGALLSVPALAAEAAVPADATDLPRVQVTALAPSIQLNVPGTVSTIDRVQ
MDRHLNVSIRDLVRYEPGVSAIGTGGRFGLDSFNIRGLSGNRTRIEIDGVSMPASFGAGV
AGGSFRAGRNFIDLDQLKSVEIVRGPASVLYPSDALGGVVSLRTKDPADYLRDGRDTYVS
VKELYDSSDRSLTSTVTMAGGNQRNGLLFVGNHREGQALANQGEVGGTGAARTRPDPRSY
GADSFLGKYVHTADSGRADRISLDGAQTRTRTDSLSNITPSVGYYRSQDENVRVRATAGQ
WFPQLGGVLADTLDWNVYWQESRTRTNTQTETATVARYFQSLPLQERVFGGKLVAVKQVG
EGSAVTQTVSYGVELSRTDAQSYAGGYGVNKRTGASGSGKAFMPGNYPLHLIPDSETDRY
AAFVQDELGLFGGRLEITPAVRVDRYAYKPQDDALYAAYNPGYVRSDYSKTRASPKLGVL
WHVNGALSAYASYAQGFRPPLYSEIAGAWNEQPFPGINIAFLPNAKLKAETSRGMELGLR
GKGEAGWFNVAAYYNRYRDFIWSGYQLKAGQVPDWVQVTPGMNLFYQAVNARKASIKGAE
ASGALRLGYFSGALQGWSLRGSAAVASGRLIEPGASGYSPLNTVDPAKLVLGVAYDAQQW
GAELIGTGVRRHSRLSNASAFRPGGYATVDLYAHYSPIANLELYAGVSNLADRKYWDWGS
LNSGALGNLVSGNGLNDAGTAGVPADRLSMPGRAFSVAARIAF