Protein Info for ABZR86_RS03715 in Dyella japonica UNC79MFTsu3.2

Annotation: GNAT family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 238 PF13302: Acetyltransf_3" amino acids 37 to 176 (140 residues), 56.6 bits, see alignment E=4.7e-19 PF00583: Acetyltransf_1" amino acids 73 to 175 (103 residues), 24.8 bits, see alignment E=2.2e-09

Best Hits

Swiss-Prot: 56% identical to YIW2_YEAST: Uncharacterized protein YIR042C (YIR042C) from Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

KEGG orthology group: None (inferred from 68% identity to brh:RBRH_01517)

Predicted SEED Role

"Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1)" (TC 3.A.5.1.1)

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I1Z6Q6 at UniProt or InterPro

Protein Sequence (238 amino acids)

>ABZR86_RS03715 GNAT family protein (Dyella japonica UNC79MFTsu3.2)
MSHTTNAFGQPIGLPVPGWTPRPRPERVALDGRYCRLEPLDAERHAAELYAAYAAAPDQR
DWTYMAAGPFQDAAGYLAYAHKVAASADPLHYTVIDRATGRAVGTLALLRIEPVHGVIEV
GWVAFSRALQRTPISTEAQYLLMKYVFDTLGYRRYEWKCDALNGPSRNTAMRLGFQYEGV
FRQAIVYKGRNRDTAWFAMIDRDWPALAAAFEAWLAPDNFAADGAQQRSLAAIRAGQA