Protein Info for ABZR86_RS03615 in Dyella japonica UNC79MFTsu3.2

Annotation: hybrid sensor histidine kinase/response regulator

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1178 signal peptide" amino acids 1 to 38 (38 residues), see Phobius details transmembrane" amino acids 752 to 772 (21 residues), see Phobius details PF07494: Reg_prop" amino acids 50 to 72 (23 residues), 18.4 bits, see alignment (E = 4.6e-07) amino acids 309 to 332 (24 residues), 19.1 bits, see alignment (E = 2.7e-07) PF07495: Y_Y_Y" amino acids 685 to 744 (60 residues), 40.4 bits, see alignment 5.4e-14 PF00512: HisKA" amino acids 802 to 862 (61 residues), 36.7 bits, see alignment 8.8e-13 PF02518: HATPase_c" amino acids 912 to 1023 (112 residues), 74.6 bits, see alignment E=2.1e-24 PF00072: Response_reg" amino acids 1049 to 1155 (107 residues), 55.6 bits, see alignment E=1.4e-18

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I1Z9N7 at UniProt or InterPro

Protein Sequence (1178 amino acids)

>ABZR86_RS03615 hybrid sensor histidine kinase/response regulator (Dyella japonica UNC79MFTsu3.2)
MTLTRDESLIPHGRAHRRACLLALAVCLWAWQLVAQAAQLPLTLYDQGSGLTSLSVVRIY
QDREGFVWVGTEKGLYRFDGMAFSQVGAEQGFQVSEVISFDEDVRGRLWVGSRAGLQLRE
GGRFGWVRPGGKPLLADRGQTLAADDAGGMWLVSGNRLWLLHEDGERNWKVTAPFSEQQR
QAVPGLDKVSAVFHRNGSTWFGCGAQLCSLRQGQLRQYGPDAGVPADKWLGFLAARDGSL
WVRGIHSVRALAPGSEQFVARDMPGDSADVAASSIDIAQDHEGRVLTRSSTGLARWNGER
WELFGTDDGLPKVGISALIVDQDGTLWIGTYGRGLLHWSGGDAVANWTSAQGLSGSLIWS
IARAPSGAVWVADDWGGSVIGPAQDHAEPWPLAVAPPHQTRTVLAAADGSIWYFLFDGRV
LRYAPDSRETRVVATLPFLVRGAFRDSQGRFWAYTLGGLYALDGATGRMERAAPDLIPTS
MCSDLAEDRAGRLWAACSAGLFRYGNGRWAHVKVEPEEALGGYENVAVTPDGRLWLSSLQ
PGLLGGAAGDADSVKLTPVDDPLLADSRIYFLRADRRGRLWVGGNNGVDVLSGQRWTRLT
SRDGLLWDETNHGAFHADEDGSVWIGTPVGLSHLLKPEELLAPRELHPWFVSAFYNGQEL
AGAHAQADFGVGGALMLRFAVLGNSSGSPVRFRYRLSDIDNDWVDAPAREARYAALPPGS
YRFELQAVDENQRRLSAPISLSFTLRPPWWRSSPAFAGAALLLLAAIVLAWRWRVRVLVK
HAQRLEQAVTVRTGQLQNVMRARSMLLARISHDLRSPLAGILESVRQWREGSRRRDYPAL
IEGSARQQLDLIDELLEFSRDELTDLELVEAPGYLHAFLHGVAEQATLLAERRGNRFVAA
YADDLPALVRLDFRRLRQVLVNLIGNAAKFTDDGYIQLAVTATPVAPRHVLLHIAVEDSG
IGIESSERERLAQPFVRGGNATHYDGYGLGLAIVTQILERMNARLSIDAAPGGGSRFGFL
LDVALADESELDQELSAGGGAVDGAGRRVLVVDDHPQSRDMLCDLLDGFGFESVPAGSGD
EALAVLREQAVELVVTDQFMPGMDGWALLRAVRRDCPGVPVLLYSSMPPRARDDGLAFDD
ALLKPASGKQLLERIDQLLATPRVGWGERSEPQQTQPG