Protein Info for ABZR86_RS03295 in Dyella japonica UNC79MFTsu3.2

Annotation: DUF4255 domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 218 transmembrane" amino acids 91 to 111 (21 residues), see Phobius details PF14065: Pvc16_N" amino acids 8 to 200 (193 residues), 107.3 bits, see alignment E=3.7e-35

Best Hits

KEGG orthology group: None (inferred from 58% identity to gbm:Gbem_2543)

Predicted SEED Role

"FIG00679392: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I1ZH48 at UniProt or InterPro

Protein Sequence (218 amino acids)

>ABZR86_RS03295 DUF4255 domain-containing protein (Dyella japonica UNC79MFTsu3.2)
MLAHALTIVANELERHLSDTYGVPAVSPQVRLGNIAEGVGGGAGSPGSIPRDVLAFSMIN
IREEKTLKNLVQPVRNDATLRVVYENPPVFLNFHIMVVATHTSYTNALLLLSRTIKFFQF
SNVMDQNSVAPASLVTNAPTNPLDQLETFKLIFDIYSPTMEEVNHLWGTLGGKQYPFVLY
TLRLLEMKFRAAQAEAGLITEVAGDTSAPSFRQIGLGS