Protein Info for ABZR86_RS02880 in Dyella japonica UNC79MFTsu3.2

Annotation: sulfate ABC transporter substrate-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 330 signal peptide" amino acids 1 to 19 (19 residues), see Phobius details TIGR00971: sulfate ABC transporter, sulfate-binding protein" amino acids 14 to 325 (312 residues), 463.7 bits, see alignment E=1.5e-143 PF01547: SBP_bac_1" amino acids 36 to 271 (236 residues), 57.7 bits, see alignment E=3e-19 PF13531: SBP_bac_11" amino acids 40 to 279 (240 residues), 136.2 bits, see alignment E=2.4e-43 PF13416: SBP_bac_8" amino acids 109 to 286 (178 residues), 33.8 bits, see alignment E=4.8e-12

Best Hits

Swiss-Prot: 61% identical to SUBI_SHIFL: Sulfate-binding protein (sbp) from Shigella flexneri

KEGG orthology group: K02048, sulfate transport system substrate-binding protein (inferred from 68% identity to reu:Reut_A1978)

MetaCyc: 61% identical to sulfate/thiosulfate ABC transporter periplasmic binding protein Sbp (Escherichia coli K-12 substr. MG1655)
ABC-19-RXN [EC: 7.3.2.5]; ABC-7-RXN [EC: 7.3.2.5, 7.3.2.3]; 7.3.2.3 [EC: 7.3.2.5, 7.3.2.3]; TRANS-RXN0-478 [EC: 7.3.2.5, 7.3.2.3]; TRANS-RXN0-479 [EC: 7.3.2.5, 7.3.2.3]

Predicted SEED Role

"Sulfate and thiosulfate binding protein CysP" in subsystem Cysteine Biosynthesis

MetaCyc Pathways

Isozymes

No predicted isozymes

Use Curated BLAST to search for 7.3.2.3 or 7.3.2.5

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I1ZRV1 at UniProt or InterPro

Protein Sequence (330 amino acids)

>ABZR86_RS02880 sulfate ABC transporter substrate-binding protein (Dyella japonica UNC79MFTsu3.2)
MLLAIAIGALAFGSAVQAQDSRLLNVSFDPTRELYKEADAAFATSWKRQTGKDLRITTSN
GGSGKQSRAVQDGLEADVVTLALAWDIDVLADRGLLARDWQSRLPEHSTPYTSTVVFLVR
KGNPKGIRDWPDLVRDGVQVITPNPKTSGGARWNFLAAWGWAQRQPGGNADKARAYVAQL
YKHVPVLDTGARGATNTFVQRGIGDVLIAWESEALQARQELGADKFDVVVPSLTILAEPP
VAVVDKVVDKHGTRAAAEAYLKFLYSPEGQALVAKHYYRPRDTSVAAKYATIFPPVKTFT
LAEQFGDWRKAQATYFADGGIYDQISEAGR