Protein Info for ABZR86_RS02215 in Dyella japonica UNC79MFTsu3.2

Annotation: FHA domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 256 transmembrane" amino acids 234 to 254 (21 residues), see Phobius details PF16697: Yop-YscD_cpl" amino acids 13 to 93 (81 residues), 43.6 bits, see alignment E=3e-15 PF00498: FHA" amino acids 21 to 84 (64 residues), 39.9 bits, see alignment E=4.7e-14

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2A890 at UniProt or InterPro

Protein Sequence (256 amino acids)

>ABZR86_RS02215 FHA domain-containing protein (Dyella japonica UNC79MFTsu3.2)
MRIEFPHSAREDFRWEQPLLRIGSAPDNDLVLAVRQAGSHHLRIQLDRRGWVLQVLPQGN
RIYVNARPVRERALLRPGDILSVGDCRMLLCSDEQPAARPPLEGVSDAARCAVALRAMGG
PLSGKVIAVDGVLEFGPLGRYPLELPQDETASFRLAWKDGQVWLESLQASERYPLRVNGA
PVERVALHPGDQIGLAMHRFLVDAPGMEREPELPPPPPEPSHLPEEDAGPRGEVWWLIVT
AAVLALGIALILLVRF