Protein Info for ABZR86_RS01920 in Dyella japonica UNC79MFTsu3.2

Annotation: phosphoglucosamine mutase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 PF02878: PGM_PMM_I" amino acids 4 to 137 (134 residues), 144.9 bits, see alignment E=2.6e-46 TIGR01455: phosphoglucosamine mutase" amino acids 7 to 444 (438 residues), 601.7 bits, see alignment E=3.7e-185 PF02879: PGM_PMM_II" amino acids 160 to 258 (99 residues), 64.5 bits, see alignment E=2.3e-21 PF02880: PGM_PMM_III" amino acids 262 to 365 (104 residues), 104.7 bits, see alignment E=6.7e-34 PF00408: PGM_PMM_IV" amino acids 375 to 444 (70 residues), 55.1 bits, see alignment E=1.3e-18

Best Hits

Swiss-Prot: 65% identical to GLMM_XYLFM: Phosphoglucosamine mutase (glmM) from Xylella fastidiosa (strain M12)

KEGG orthology group: K03431, phosphoglucosamine mutase [EC: 5.4.2.10] (inferred from 65% identity to xfm:Xfasm12_0810)

Predicted SEED Role

"Phosphoglucosamine mutase (EC 5.4.2.10)" in subsystem Sialic Acid Metabolism or UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis (EC 5.4.2.10)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 5.4.2.10

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2ABI4 at UniProt or InterPro

Protein Sequence (450 amino acids)

>ABZR86_RS01920 phosphoglucosamine mutase (Dyella japonica UNC79MFTsu3.2)
MSERKYFGTDGIRGPVGQWPISADFMLRLGRAAGMALARDTREGRPKVLIGKDTRVSGYM
FEAALEAGLVAAGVDVGLLGPMPTPAVAFLTRSLRAQAGIVISASHNPHQDNGIKFFSAI
GEKLSDDVEAAIELGLDAEFTTEAPERLGKASRIDDAGGRYIEFCKRTLVDSEFTLRGLR
IVLDCANGATYQVAPKVFAELGAEVIAIGHKPDGFNINRGVGSTHPQTLQLAVLEHHADI
GIAFDGDGDRVQLVDREGVLADGDDMLFILARAWAAQGRLKGPVVGTLMSNYGLQQALAA
LDVDLIRANVGDRYVLQKLKEHGGQLGGETSGHILCLDRATTGDGIVSALAVLEALGGRD
LAEARQGLYKMPQIMINVRANGARESLHSDEVKQALAETEEALRGRGRVVLRASGTEPLV
RVTVEAADEAEVRRMAEQLAEVVKSAAERS