Protein Info for ABZR86_RS01815 in Dyella japonica UNC79MFTsu3.2

Annotation: outer membrane lipoprotein chaperone LolA

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 219 signal peptide" amino acids 1 to 22 (22 residues), see Phobius details TIGR00547: outer membrane lipoprotein carrier protein LolA" amino acids 6 to 205 (200 residues), 72.2 bits, see alignment E=2e-24 PF03548: LolA" amino acids 37 to 197 (161 residues), 152.5 bits, see alignment E=9.2e-49

Best Hits

Swiss-Prot: 49% identical to LOLA_XANAC: Outer-membrane lipoprotein carrier protein (lolA) from Xanthomonas axonopodis pv. citri (strain 306)

KEGG orthology group: K03634, outer membrane lipoprotein carrier protein (inferred from 49% identity to xac:XAC2008)

Predicted SEED Role

"Outer membrane lipoprotein carrier protein LolA"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2ADD2 at UniProt or InterPro

Protein Sequence (219 amino acids)

>ABZR86_RS01815 outer membrane lipoprotein chaperone LolA (Dyella japonica UNC79MFTsu3.2)
MNRLLTFCAALALTAAGAVHAAAGPARARLDSFATGLHALTGQFTQTLTDANGSKGKTSA
GTLSLEAPRQFRWETLTPYKQTIVADGSRVWLYDPDLEQVTVRVQSTEEAHSPLTVLTDL
KQMDRDFKVTEQGEHDGLAWLRLTSTAKDPQFDYADLGFDANGLARMTFRDQLGAVTEIR
FANWQRNPTIAPATFNFVPPKGADVIGDAPVIQTQPLKD