Protein Info for ABZR86_RS01685 in Dyella japonica UNC79MFTsu3.2

Annotation: Gfo/Idh/MocA family oxidoreductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 398 signal peptide" amino acids 1 to 17 (17 residues), see Phobius details PF03447: NAD_binding_3" amino acids 5 to 118 (114 residues), 40.4 bits, see alignment E=6.6e-14 PF01408: GFO_IDH_MocA" amino acids 6 to 121 (116 residues), 87.9 bits, see alignment E=1.3e-28 PF02894: GFO_IDH_MocA_C" amino acids 135 to 378 (244 residues), 61.3 bits, see alignment E=1.8e-20

Best Hits

KEGG orthology group: None (inferred from 60% identity to tsa:AciPR4_0230)

Predicted SEED Role

"Nucleoside-diphosphate-sugar epimerases"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2AHD2 at UniProt or InterPro

Protein Sequence (398 amino acids)

>ABZR86_RS01685 Gfo/Idh/MocA family oxidoreductase (Dyella japonica UNC79MFTsu3.2)
MKRLGMGLVGPGFIAAHHLDAVRRLGDVDIVGIAGSSLESAQARARDLGVERAYANYREL
LADPAVQVIHNTTPNHLHREISLAALQAGKHVISDKPLASNLEESRELHEAARKAGVAHV
VTFNYRGYPLIQQARAMIAKGKLGAQVFVHGCYLQDWLTDERAYSWRLDPKRGGASSALG
DIGSHWCDLAEHVTGARIVAVLADLHTAVPVREVPAASPKAFAKASKSAPRKKIKIASED
LASVLLRFDNGARGCVTIGQVLPGHKNDLRLEVSGREASLAWRQEQPNDLWIGHHAQPNT
VLTRDPALLDPAARGYAHLPAGHPEAWPDAFRNLIADAYAWIRQGGAPAKKPAALPTFAD
GYRNSLLVDAMLRSHAAGGAWQDVEDPSATPRKRGARG