Protein Info for ABZR86_RS01525 in Dyella japonica UNC79MFTsu3.2

Annotation: ATP-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 469 transmembrane" amino acids 12 to 35 (24 residues), see Phobius details amino acids 165 to 186 (22 residues), see Phobius details PF00672: HAMP" amino acids 186 to 234 (49 residues), 32.1 bits, see alignment 1.8e-11 PF00512: HisKA" amino acids 241 to 303 (63 residues), 41 bits, see alignment E=2.4e-14 PF02518: HATPase_c" amino acids 349 to 456 (108 residues), 80.9 bits, see alignment E=1.4e-26

Best Hits

KEGG orthology group: None (inferred from 46% identity to bbr:BB3183)

Predicted SEED Role

"Sensory histidine kinase QseC" in subsystem Orphan regulatory proteins

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2AK62 at UniProt or InterPro

Protein Sequence (469 amino acids)

>ABZR86_RS01525 ATP-binding protein (Dyella japonica UNC79MFTsu3.2)
MALRIRSLRRRLFIVMLAIFVVAWGITLTCLGVRFSKERTGLWDSNLNDIGREILVSMPA
DVSRLDGNSNLRLPAHTAPPPEHRGKLGRLIFQVWIKDRHHLVVHSLDPFRVPLRPDFLD
GFVTRTIDGEEWRIFAITDARGEVQVQVGKPTADLAAELRQGVRIGLITTALLLLVLAVA
IQRVLYWSLRPITRIRQAITARDTLDLTPLPDHDLPNEVRPLVESFNRMLARLDRAMHHE
RQFLAEAAHELRTPLAALLTHAQVALRSRSLEEAQAPLRQLVKGVERSARLSQQLLDSAR
LEADRPSSERVPLELADLVAMLTREFETIAAAKHQSITLDTCPSPIEGNVDELGILIGNL
LDNALRYTPPGGRVAVRCRRVAAAVQLQVQDNGPGVTEEDRPRIFDRFYRVAGSNERGSG
IGLSLVARIAQSHAAAIEIHEGLDGGGFGVTVVFPAHVSANIGTTLAEA