Protein Info for ABZR86_RS01365 in Dyella japonica UNC79MFTsu3.2

Annotation: family 20 glycosylhydrolase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 737 signal peptide" amino acids 1 to 28 (28 residues), see Phobius details PF02838: Glyco_hydro_20b" amino acids 27 to 150 (124 residues), 95.5 bits, see alignment E=1e-30 PF00728: Glyco_hydro_20" amino acids 153 to 471 (319 residues), 362.8 bits, see alignment E=5.5e-112 PF13290: CHB_HEX_C_1" amino acids 529 to 570 (42 residues), 25 bits, see alignment 3.7e-09 PF00754: F5_F8_type_C" amino acids 595 to 727 (133 residues), 40.3 bits, see alignment E=8.3e-14

Best Hits

Predicted SEED Role

"Beta-hexosaminidase (EC 3.2.1.52)" in subsystem Chitin and N-acetylglucosamine utilization or N-Acetyl-Galactosamine and Galactosamine Utilization (EC 3.2.1.52)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 3.2.1.52

Use Curated BLAST to search for 3.2.1.52

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2ANT1 at UniProt or InterPro

Protein Sequence (737 amino acids)

>ABZR86_RS01365 family 20 glycosylhydrolase (Dyella japonica UNC79MFTsu3.2)
MRKANVLRCGVAVVALAWAAFAHAGLALVPYPQHVEEGKGSFVLDPKVGIEAPADARSKE
IAAFLHDAVEAQAGIDLHMAGKGRRIALRLDPALAGEEAYRLEVTPRGIEIRASTDQGLF
WGVQTLRQLLPPDASGSAKVTIPTVRIEDAPAFGYRGHMLDVGRHFYPVSFVKKQLDLMS
YYKLNVFRWHLTEDQGWRIEIKRYPKLTEVGAWRTEADGSRYGGFYTQEQIREVVEYARQ
RNIMVIPEIEMPGHSSAAVAAYPELSCAKKPIAVPTGWGVFSDVFCPADENVYVFLQNVL
DEVLPLFPSPYVHIGGDEVPAGAWSHCEDCDKLIREQGLENEAGLQSYFIRRMQVYLAGK
GKTMIGWDEVLEGGVDPAAVVEVWRGDAGLGKAFANGNRVINASPYYLDSPLTRLTVEKL
YLVDPLGNADFAQSKQVLGAEAPLWSERADPLNAEQRLYPRLLAFAERLWRGGTADAAAY
ADFHQRLAAQYPRLDAWQVAYAPEDRDTAAYAVSANAAHDGWRVSAQRGFDDVVSHYTTD
GSEPTAASPSFTDVLDLKQPGTLRIVPFRRGRAYDHPRSFQLERSAAFGAAASTDPAPDA
AYSGHGAATLTDGLLGGVEFKNGAWLGWEEQDPKLSLDLGSVTELHEVSVGVLQQDESWI
WWPRKVRFAASADGKHWTTLREVKIKPIERDHVGHIQRVAYTASRPFSARYLRIELTRHP
AEDERHTWTFVDEILAR